RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 RFX1P22670 979 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 PROZP22891 400 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 RGS2P41220 211 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 SREBF2Q12772 1141 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 TRAPPC11Q7Z392 1133 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 CCDC102AQ96A19 550 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 CPB2Q96IY4 423 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 NT5C1BQ96P26 610 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 APBA2Q99767 749 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 GOLPH3Q9H4A6 298 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 ZNF185O15231 689 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
COL25A1-201ENST00000399126 FGFR4P22455 802 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
COL25A1-201ENST00000399126 MCL1Q07820 350 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
COL25A1-201ENST00000399126 AMHR2Q16671 573 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 BRSK2Q8IWQ3 736 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 KIAA0319LQ8IZA0 1049 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 PSMB7Q99436 277 aa16.3■□□□□ 0.2
COL25A1-201ENST00000399126 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
COL25A1-201ENST00000399126 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
COL25A1-201ENST00000399126 MAGEB2O15479 319 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 AOC2O75106 756 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 PIK3CAP42336 1068 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 TM4SF4P48230 202 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 MPZL3Q6UWV2 235 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
COL25A1-201ENST00000399126 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 SHC3Q92529 594 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 CGRRF1Q99675 332 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
COL25A1-201ENST00000399126 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 UMODL1Q5DID0 1318 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 OGTO15294 1046 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 TACC1O75410 805 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 F2P00734 622 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 COL1A2P08123 1366 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 PAX3P23760 479 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 PTPROQ16827 1216 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 FAM71AQ8IYT1 594 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 TRIM58Q8NG06 486 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 EPS8L1Q8TE68 723 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 CDT1Q9H211 546 aa16.29■□□□□ 0.2
COL25A1-201ENST00000399126 CPSF3Q9UKF6 684 aaKnown RBP16.29■□□□□ 0.2
COL25A1-201ENST00000399126 GPR25O00155 361 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 ASAP2O43150 1006 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 CA12O43570 354 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 IGHA2P01877 340 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 PHKA2P46019 1235 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 MFAP3P55082 362 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 VPS36Q86VN1 386 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 NOX5Q96PH1 765 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 ANKRD62A6NC57 917 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 MYADML2A6NDP7 307 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
COL25A1-201ENST00000399126 PALMO75781 387 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 PSMC4P43686 418 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
COL25A1-201ENST00000399126 PAPD7Q5XG87 772 aaKnown RBP16.28■□□□□ 0.2
COL25A1-201ENST00000399126 SOCS4Q8WXH5 440 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
COL25A1-201ENST00000399126 FTCDO95954 541 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
COL25A1-201ENST00000399126 CXCL8P10145 99 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 CHRNB2P17787 502 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 ABCB4P21439 1286 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 TNFAIP3P21580 790 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 TMOD1P28289 359 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 CXCR5P32302 372 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 DNA2P51530 1060 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 GALCP54803 685 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
COL25A1-201ENST00000399126 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 LUC7LQ9NQ29 371 aaKnown RBP16.27■□□□□ 0.2
COL25A1-201ENST00000399126 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
COL25A1-201ENST00000399126 PACSIN2Q9UNF0 486 aaPredicted RBP16.27■□□□□ 0.2
COL25A1-201ENST00000399126 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
COL25A1-201ENST00000399126 ARF4P18085 180 aaPredicted RBP16.27■□□□□ 0.19
COL25A1-201ENST00000399126 ENPEPQ07075 957 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 TRIM32Q13049 653 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 TEX35Q5T0J7 233 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 ZNF280DQ6N043 979 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 EFCAB13Q8IY85 973 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 TRIB2Q92519 343 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms