RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GAS2O43903 313 aaKnown RBP8.81□□□□□ -1
SPTLC3-201ENST00000399002 DEAF1O75398 565 aaPredicted RBP8.81□□□□□ -1
SPTLC3-201ENST00000399002 PRKCBP05771 671 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 TYK2P29597 1187 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 GTF2H1P32780 548 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 RAD23BP54727 409 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 GPSM2P81274 684 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 CCZ1BP86790 482 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 CCZ1P86791 482 aaPredicted RBP8.81□□□□□ -1
SPTLC3-201ENST00000399002 HLFQ16534 295 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 RHPN2Q8IUC4 686 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 PASD1Q8IV76 773 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 SLC26A7Q8TE54 656 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
SPTLC3-201ENST00000399002 CHAMP1Q96JM3 812 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 CDYLQ9Y232 598 aa8.81□□□□□ -1
SPTLC3-201ENST00000399002 ANGPT2O15123 496 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 MAGEB2O15479 319 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 NPEPPSP55786 919 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TPI1P60174 286 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 ITIH4Q14624 930 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 NUDT18Q6ZVK8 323 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 SLC35G2Q8TBE7 412 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 ANKRD7Q92527 254 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 EEF2KMTQ96G04 330 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TRIM9Q9C026 710 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 SMYD3Q9H7B4 428 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 C17orf75Q9HAS0 396 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CCDC195A0A1B0GUA6 201 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TRAPPC3O43617 180 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TBC1D4O60343 1298 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 RAD17O75943 681 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 APOA1P02647 267 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FMO5P49326 533 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CUL3Q13618 768 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 PTPN21Q16825 1174 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 ANGPTL8Q6UXH0 198 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 C16orf86Q6ZW13 317 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 PRMT1Q99873 361 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 SH3GL3Q99963 347 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TMEM8AQ9HCN3 771 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TMEM51Q9NW97 253 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 A8MXQ7 604 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 RSPH10B2B2RC85 870 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 SUPT3HO75486 399 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 RSPH10BP0C881 870 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 PGM1P36871 562 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CDH6P55285 790 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 ZNF235Q14590 738 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 SV2CQ496J9 727 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 LRRC8EQ6NSJ5 796 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FAR2Q96K12 515 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CCDC134Q9H6E4 229 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 RSAD1Q9HA92 442 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 MAGED2Q9UNF1 606 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 RNF103-CHMP3A0A140T963 221 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FAM47DPA6NHR8 397 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 C3orf70A6NLC5 250 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 EXTL3O43909 919 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FDFT1P37268 417 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FNTAP49354 379 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 VEPH1Q14D04 833 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 EPHA10Q5JZY3 1008 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 TWF2Q6IBS0 349 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 C1orf228Q6PIY5 440 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 FAM47EQ6ZV65 393 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 MRPL1Q9BYD6 325 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 DDX47Q9H0S4 455 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 ZNF200P98182 395 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 ADRM1Q16186 407 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CEP55Q53EZ4 464 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 HHIPL2Q6UWX4 724 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CCNI2Q6ZMN8 369 aaPredicted RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 NOP9Q86U38 636 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 CCNJLQ8IV13 435 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 PCYOX1LQ8NBM8 494 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 APPL2Q8NEU8 664 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 CATSPERBQ9H7T0 1116 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 GID8Q9NWU2 228 aa8.8□□□□□ -1
SPTLC3-201ENST00000399002 CLTCQ00610 1675 aaKnown RBP8.8□□□□□ -1
SPTLC3-201ENST00000399002 KDM1AO60341 852 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 KITP10721 976 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 GTF2H3Q13889 308 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 ARID5BQ14865 1188 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 LINC00523Q86TU6 105 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CDC26Q8NHZ8 85 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 RMDN1Q96DB5 314 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 C18orf8Q96DM3 657 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 FOPNLQ96NB1 174 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 SERPINB12Q96P63 405 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 DHX35Q9H5Z1 703 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 WARS2Q9UGM6 360 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 SRP68Q9UHB9 627 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 MAD2L2Q9UI95 211 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms