RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 SH2B1Q9NRF2 756 aaPredicted RBP12.22□□□□□ -0.45
SRMP1-201ENST00000398959 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
SRMP1-201ENST00000398959 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 SIT1Q9Y3P8 196 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 CDY1Q9Y6F8 540 aa12.22□□□□□ -0.45
SRMP1-201ENST00000398959 ZNF638Q14966 1978 aaKnown RBP12.21□□□□□ -0.45
SRMP1-201ENST00000398959 E9PMD0 336 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 DCNP07585 359 aaKnown RBP12.21□□□□□ -0.45
SRMP1-201ENST00000398959 FGFR3P22607 806 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 TKTP29401 623 aaKnown RBP12.21□□□□□ -0.45
SRMP1-201ENST00000398959 NPTX2P47972 431 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 RAB33AQ14088 237 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 UPP1Q16831 310 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 UVSSAQ2YD98 709 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 KRT79Q5XKE5 535 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 IGSF22Q8N9C0 903 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 FGF13Q92913 245 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 ACO2Q99798 780 aaKnown RBP12.21□□□□□ -0.45
SRMP1-201ENST00000398959 MRPL4Q9BYD3 311 aaKnown RBP12.21□□□□□ -0.45
SRMP1-201ENST00000398959 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 HCFC1R1Q9NWW0 138 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 PCDHB6Q9Y5E3 794 aa12.21□□□□□ -0.45
SRMP1-201ENST00000398959 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 I3L4J1 428 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 LAD1O00515 517 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 HIP1RO75146 1068 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 GRM5P41594 1212 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 BRCC3P46736 316 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 ANKS3Q6ZW76 656 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 ADSSL1Q8N142 457 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 CEP120Q8N960 986 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 ITFG1Q8TB96 612 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 KCNG4Q8TDN1 519 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 SHDQ96IW2 340 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 TCHPQ9BT92 498 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 CDT1Q9H211 546 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
SRMP1-201ENST00000398959 KIF26AQ9ULI4 1882 aaPredicted RBP12.2□□□□□ -0.46
SRMP1-201ENST00000398959 NUP210Q8TEM1 1887 aaPredicted RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 POU2F2P09086 479 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 TOB1P50616 345 aaPredicted RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 GPC5P78333 572 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 RINT1Q6NUQ1 792 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 DTHD1Q6ZMT9 781 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 RTL10Q7L3V2 364 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 PJA1Q8NG27 643 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 SNX27Q96L92 541 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 KXD1Q9BQD3 176 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 TARS2Q9BW92 718 aaKnown RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 ARHGAP28Q9P2N2 729 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 RBM19Q9Y4C8 960 aaKnown RBP12.19□□□□□ -0.46
SRMP1-201ENST00000398959 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 DENND4CQ5VZ89 1909 aa12.19□□□□□ -0.46
SRMP1-201ENST00000398959 TSC2P49815 1807 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 PODXLO00592 558 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 PRRG1O14668 218 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 SLC16A4O15374 487 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 LRG1P02750 347 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 MCF2P10911 925 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 HARSP12081 509 aaKnown RBP12.18□□□□□ -0.46
SRMP1-201ENST00000398959 CDC25AP30304 524 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 ELF1P32519 619 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 PRPHP41219 470 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 ARPP19P56211 112 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 STARD6P59095 220 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 ROR1Q01973 937 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
SRMP1-201ENST00000398959 STRN3Q13033 797 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 SNW1Q13573 536 aaKnown RBP12.18□□□□□ -0.46
SRMP1-201ENST00000398959 XKR4Q5GH76 650 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
SRMP1-201ENST00000398959 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 ZC3H14Q6PJT7 736 aaKnown RBP12.18□□□□□ -0.46
SRMP1-201ENST00000398959 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 CD300LGQ6UXG3 332 aa12.18□□□□□ -0.46
SRMP1-201ENST00000398959 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms