RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 GALNT4Q8N4A0 578 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 DTNBP1Q96EV8 351 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 MRPL1Q9BYD6 325 aaKnown RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 SLC16A3O15427 465 aaKnown RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 SLC30A9Q6PML9 568 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 C16orf89Q6UX73 402 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 TEKT4Q8WW24 435 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.42□□□□□ -0.42
TMF1-201ENST00000398559 EME1Q96AY2 570 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PCMTD2Q9NV79 361 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
TMF1-201ENST00000398559 ARAP3Q8WWN8 1544 aa12.42□□□□□ -0.42
TMF1-201ENST00000398559 MROH7-TTC4A0A0A0MT08 1334 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 C9orf72Q96LT7 481 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 TDRD3Q9H7E2 651 aaKnown RBP12.41□□□□□ -0.42
TMF1-201ENST00000398559 PDXKO00764 312 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 APRTP07741 180 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMF1-201ENST00000398559 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
TMF1-201ENST00000398559 COBLL1Q53SF7 1204 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 AGAP3Q96P47 875 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 STK33Q9BYT3 514 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 ADCY3O60266 1144 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 UBTFL6P0CB48 400 aaPredicted RBP12.41□□□□□ -0.42
TMF1-201ENST00000398559 GNAT1P11488 350 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 USP11P51784 963 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 RRM2BQ7LG56 351 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 HAUS6Q7Z4H7 955 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 CLEC4FQ8N1N0 589 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
TMF1-201ENST00000398559 DNAJC9Q8WXX5 260 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 CDH16O75309 829 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 WDR47O94967 919 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 KCNJ6P48051 423 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 SULT1E1P49888 294 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 ABCE1P61221 599 aaKnown RBP12.41□□□□□ -0.42
TMF1-201ENST00000398559 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 TRIM54Q9BYV2 358 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 TMEM117Q9H0C3 514 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 EYA4O95677 639 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 RMDN1Q96DB5 314 aa12.41□□□□□ -0.42
TMF1-201ENST00000398559 ZNF200P98182 395 aaPredicted RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 TRIM60Q495X7 471 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 MTA3Q9BTC8 594 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 SPON2Q9BUD6 331 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 PCDHGB4Q9UN71 923 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 CFAP74Q9C0B2 1584 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TRADDQ15628 312 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 STOX1Q6ZVD7 989 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 ELMO2Q96JJ3 720 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 SENP7Q9BQF6 1050 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 HOXC10Q9NYD6 342 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 ZC3H7BQ9UGR2 993 aaKnown RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 AIM2O14862 343 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 OCM2P0CE71 109 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 COPB2P35606 906 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 USP6NLQ92738 828 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TRIM9Q9C026 710 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 SLC40A1Q9NP59 571 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 SHROOM2Q13796 1616 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 KRT8P05787 483 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 HMOX2P30519 316 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 AP3M2P53677 418 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 PTK7Q13308 1070 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 ACCSLQ4AC99 568 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 RAD9BQ6WBX8 426 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 SH3KBP1Q96B97 665 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TBC1D23Q9NUY8 699 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TMEM120BA0PK00 339 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TLR2O60603 784 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TCN1P20061 433 aaPredicted RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
TMF1-201ENST00000398559 SOX11P35716 441 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 TPI1P60174 286 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 RAB6BQ9NRW1 208 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 HSPBP1Q9NZL4 362 aa12.4□□□□□ -0.42
TMF1-201ENST00000398559 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.43
TMF1-201ENST00000398559 SRP72O76094 671 aaKnown RBP12.4□□□□□ -0.43
TMF1-201ENST00000398559 KLK7P49862 253 aa12.4□□□□□ -0.43
TMF1-201ENST00000398559 ZNF235Q14590 738 aa12.4□□□□□ -0.43
TMF1-201ENST00000398559 NBPF20Q3BBV1 942 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms