RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 NRBP2Q9NSY0 501 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 SBF2Q86WG5 1849 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 LRRD1A4D1F6 860 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 CFHP08603 1231 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 RALAP11233 206 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 CHRNA3P32297 505 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PSMC4P43686 418 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 STAT5BP51692 787 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 KYNUQ16719 465 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 MAP4K3Q8IVH8 894 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 SULF1Q8IWU6 871 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 WNT8AQ9H1J5 351 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 KRT1P04264 644 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 KCNA3P22001 575 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 LACTBP83111 547 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 DRP2Q13474 957 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 ACAD10Q6JQN1 1059 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 RBBP8NLQ8NC74 664 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 PIK3R5Q8WYR1 880 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 RNF19AQ9NV58 838 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 PCSK1NQ9UHG2 260 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 NFKBIEO00221 500 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 O00370 1275 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 RFX1P22670 979 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 ANXA13P27216 316 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 DSG3P32926 999 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 NCOA4Q13772 614 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 PTGISQ16647 500 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 SMTNL2Q2TAL5 461 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 TTC27Q6P3X3 843 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 OR5B17Q8NGF7 314 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 VPS37BQ9H9H4 285 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 XPNPEP1Q9NQW7 623 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 GTF3C4Q9UKN8 822 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 UMODL1Q5DID0 1318 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 GMNCA6NCL1 334 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 MUTP22033 750 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 TNFSF9P41273 254 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 SP2Q02086 613 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 PRPF31Q8WWY3 499 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 TEPSINQ96N21 525 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 EPN3Q9H201 632 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 C10orf88Q9H8K7 445 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 STXBP5LQ9Y2K9 1186 aa11.13□□□□□ -0.63
CPSF1P1-201ENST00000397477 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 CACNA2D3Q8IZS8 1091 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 BTNL10A8MVZ5 291 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 PIAS1O75925 651 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 OATP04181 439 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SUPT20HL2P0C7V6 817 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 MAPTP10636 758 aaKnown RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 CHN1P15882 459 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 GTF2H1P32780 548 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 PPP2R5EQ16537 467 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 DNAJC24Q6P3W2 148 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SLC39A4Q6P5W5 647 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 TADA2BQ86TJ2 420 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SHC3Q92529 594 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 RUBCNQ92622 972 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 GJC2Q5T442 439 aaPredicted RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 KDM7AQ6ZMT4 941 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SLFN11Q7Z7L1 901 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZBTB8OSQ8IWT0 167 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms