RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 JADE1Q6IE81 842 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 IQCEQ6IPM2 695 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 LRRC8DQ7L1W4 858 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 CACNA2D4Q7Z3S7 1137 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 ZNF397Q8NF99 534 aaPredicted RBP29.71■■■□□ 2.35
CPNE1-203ENST00000397442 TOX2Q96NM4 488 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 RNF39Q9H2S5 420 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 PITPNM1O00562 1244 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 TLR3O15455 904 aaKnown RBP29.7■■■□□ 2.35
CPNE1-203ENST00000397442 HLA-DRAP01903 254 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 SKILP12757 684 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 FAAP100Q0VG06 881 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 TRIM60Q495X7 471 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 E4F1Q66K89 784 aaPredicted RBP29.7■■■□□ 2.35
CPNE1-203ENST00000397442 PDXDC1Q6P996 788 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 ALKAL1Q6UXT8 129 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 RRAGAQ7L523 313 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 SNX27Q96L92 541 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 BAG1Q99933 345 aaPredicted RBP29.7■■■□□ 2.35
CPNE1-203ENST00000397442 MCOLN1Q9GZU1 580 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 PLEKHA5Q9HAU0 1116 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 ZKSCAN5Q9Y2L8 839 aa29.7■■■□□ 2.35
CPNE1-203ENST00000397442 LRRC53A6NM62 1247 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 RECQL4O94761 1208 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 HNRNPH3P31942 346 aaKnown RBP29.69■■■□□ 2.34
CPNE1-203ENST00000397442 TFAMQ00059 246 aaKnown RBP29.69■■■□□ 2.34
CPNE1-203ENST00000397442 TLE2Q04725 743 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 BIRC3Q13489 604 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 WDR59Q6PJI9 974 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 TRAPPC11Q7Z392 1133 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 ARHGEF19Q8IW93 802 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 CCDC112Q8NEF3 446 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 PAWRQ96IZ0 340 aaKnown RBP29.69■■■□□ 2.34
CPNE1-203ENST00000397442 PCDHB2Q9Y5E7 798 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 AKAP5P24588 427 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 GPNMBQ14956 572 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 CD302Q8IX05 232 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 TRAIPQ9BWF2 469 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 FAM105AQ9NUU6 356 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 PYCARDQ9ULZ3 195 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 PLAGL2Q9UPG8 496 aa29.69■■■□□ 2.34
CPNE1-203ENST00000397442 UMODL1Q5DID0 1318 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 JAM2P57087 298 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 MEA1Q16626 185 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 ELMO3Q96BJ8 720 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 PI4K2AQ9BTU6 479 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 TMEM106CQ9BVX2 250 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 APOL6Q9BWW8 343 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 C11orf49Q9H6J7 331 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 DNAJC12Q9UKB3 198 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 C2CD2Q9Y426 696 aa29.68■■■□□ 2.34
CPNE1-203ENST00000397442 CST3P01034 146 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-203ENST00000397442 TMEM191BP0C7N4 346 aa29.67■■■□□ 2.34
CPNE1-203ENST00000397442 ZSCAN20P17040 1043 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-203ENST00000397442 PIK3CAP42336 1068 aa29.67■■■□□ 2.34
CPNE1-203ENST00000397442 YARSP54577 528 aaKnown RBP29.67■■■□□ 2.34
CPNE1-203ENST00000397442 ZMAT2Q96NC0 199 aaKnown RBP29.67■■■□□ 2.34
CPNE1-203ENST00000397442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.67■■■□□ 2.341e-6■■■■■ 117.8
CPNE1-203ENST00000397442 DAAM1Q9Y4D1 1078 aa29.67■■■□□ 2.34
CPNE1-203ENST00000397442 PDCD11Q14690 1871 aaKnown RBP29.66■■■□□ 2.34
CPNE1-203ENST00000397442 DCDC2CA8MYV0 355 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 NCOA4Q13772 614 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 XKR4Q5GH76 650 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 TMEM130Q8N3G9 435 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 ANKRD36BP1Q96IX9 119 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 CNTN3Q9P232 1028 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 NBNO60934 754 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 ZC3H11AO75152 810 aaKnown RBP eCLIP29.66■■■□□ 2.34
CPNE1-203ENST00000397442 TNNC2P02585 160 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 RFX1P22670 979 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 TMEM132DQ14C87 1099 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 NT5DC4Q86YG4 428 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 CXorf38Q8TB03 319 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 HELQQ8TDG4 1101 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 IFIH1Q9BYX4 1025 aaKnown RBP29.66■■■□□ 2.34
CPNE1-203ENST00000397442 GPR88Q9GZN0 384 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 MYO6Q9UM54 1294 aa29.66■■■□□ 2.34
CPNE1-203ENST00000397442 TANC1Q9C0D5 1861 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 PHACTR2O75167 634 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 CAPN2P17655 700 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 RAPGEF1Q13905 1077 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 C1orf127Q8N9H9 656 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 SYN2Q92777 582 aaPredicted RBP29.65■■■□□ 2.34
CPNE1-203ENST00000397442 TATDN2Q93075 761 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 ADAM2Q99965 735 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 STK33Q9BYT3 514 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 NUCKS1Q9H1E3 243 aaKnown RBP29.65■■■□□ 2.34
CPNE1-203ENST00000397442 UBE2TQ9NPD8 197 aaPredicted RBP29.65■■■□□ 2.34
CPNE1-203ENST00000397442 SIX4Q9UIU6 781 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 DERAQ9Y315 318 aa29.65■■■□□ 2.34
CPNE1-203ENST00000397442 ZBTB6Q15916 424 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 MRPL10Q7Z7H8 261 aaKnown RBP29.64■■■□□ 2.34
CPNE1-203ENST00000397442 ZSCAN30Q86W11 494 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 KAT5Q92993 513 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 KIF12Q96FN5 646 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 NT5C1BQ96P26 610 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 CHP1Q99653 195 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 KLK14Q9P0G3 267 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 PARP2Q9UGN5 583 aa29.64■■■□□ 2.34
CPNE1-203ENST00000397442 MEIS3P2A8K0S8 358 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms