RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PCDHA11Q9Y5I1 949 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 EPOPA6NHQ4 379 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 CXCL8P10145 99 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 DEFB103AP81534 67 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 DSC3Q14574 896 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 SYCP1Q15431 976 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 CBWD6Q4V339 395 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 CBWD3Q5JTY5 395 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 CBWD5Q5RIA9 395 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 USP37Q86T82 979 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 DRC7Q8IY82 874 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 SPC24Q8NBT2 197 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 POP1Q99575 1024 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 TMX1Q9H3N1 280 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 PRDM6Q9NQX0 595 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 TOPORSQ9NS56 1045 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 GBF1Q92538 1859 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 PTPRJQ12913 1337 aa18.35■□□□□ 0.53
TSPAN4-205ENST00000397406 GTPBP10A4D1E9 387 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 PMM2O15305 246 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 STX10O60499 249 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 MGEA5O60502 916 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 DLATP10515 647 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 KLK7P49862 253 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 WDR5P61964 334 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 TBX2Q13207 712 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 TWF2Q6IBS0 349 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 CGRRF1Q99675 332 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 NXF3Q9H4D5 531 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 MMRN2Q9H8L6 949 aa18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 RPF1Q9H9Y2 349 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-205ENST00000397406 SPTBN5Q9NRC6 3674 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 DLL1O00548 723 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 N4BP1O75113 896 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 IL18RAPO95256 599 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 CA3P07451 260 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 GTF2H1P32780 548 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 GCLMP48507 274 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 MYL7Q01449 175 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 SURF1Q15526 300 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 SMG8Q8ND04 991 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 ZNF516Q92618 1163 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 ACAP3Q96P50 834 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 FNBP1Q96RU3 617 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 TMEM117Q9H0C3 514 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 SNTG2Q9NY99 539 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 IMPACTQ9P2X3 320 aa18.33■□□□□ 0.53
TSPAN4-205ENST00000397406 PTPRSQ13332 1948 aa18.33■□□□□ 0.52
TSPAN4-205ENST00000397406 TTC26A0AVF1 554 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 LCHNA4D1U4 455 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 RFXAPO00287 272 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 P4HA2O15460 535 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 MXI1P50539 228 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 DPY19L2P1Q6NXN4 242 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 C15orf39Q6ZRI6 1047 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 PHOSPHO2Q8TCD6 241 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 SLC9A7Q96T83 725 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 CRACR2AQ9BSW2 395 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 TRAIPQ9BWF2 469 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 SLC28A3Q9HAS3 691 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 HES2Q9Y543 173 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 IPPQ9Y573 584 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 LACTBL1A8MY62 500 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 BAIAP3O94812 1187 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 ACTN1P12814 892 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 TNNI1P19237 187 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 TAP1Q03518 808 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 EXOC3L4Q17RC7 722 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 LMBRD2Q68DH5 695 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 KRT39Q6A163 491 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 CNKSR3Q6P9H4 555 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 SV2AQ7L0J3 742 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 EFCAB13Q8IY85 973 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 FAM212AQ96EL1 285 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 COL25A1Q9BXS0 654 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 COQ4Q9Y3A0 265 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 PCDHB2Q9Y5E7 798 aa18.32■□□□□ 0.52
TSPAN4-205ENST00000397406 REV3LO60673 3130 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 RECQL4O94761 1208 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 SLC9A1P19634 815 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 PON1P27169 355 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 ZACNQ401N2 412 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 PPP2R2DQ66LE6 453 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms