RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ALKAL1Q6UXT8 129 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 SV2AQ7L0J3 742 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 DEFB128Q7Z7B8 93 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 KIF12Q96FN5 646 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 POP1Q99575 1024 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 RSAD1Q9HA92 442 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 TMEM161AQ9NX61 479 aa25.47■■□□□ 1.67
TSPAN4-202ENST00000397396 CCDC85CA6NKD9 419 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 PHACTR2O75167 634 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 WNT7BP56706 349 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 C15orf39Q6ZRI6 1047 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 TMC6Q7Z403 805 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 EFCAB13Q8IY85 973 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 CCDC150Q8NCX0 1101 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 BEST2Q8NFU1 509 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 PDLIM2Q96JY6 352 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 SLC38A7Q9NVC3 462 aa25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 UBQLN1Q9UMX0 589 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 R3HCC1Q9Y3T6 440 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-202ENST00000397396 HOXA2O43364 376 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 EVI5O60447 810 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 ZC3H11AO75152 810 aaKnown RBP eCLIP25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 C4BPAP04003 597 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 ACTN1P12814 892 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 RFX1P22670 979 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 EPC2Q52LR7 807 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 FIGNQ5HY92 759 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 ZNF598Q86UK7 904 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 C7orf61Q8IZ16 206 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 NEK11Q8NG66 645 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 LINC01599Q8WXQ3 324 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 IMPG2Q9BZV3 1241 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 MTMR12Q9C0I1 747 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 RNF39Q9H2S5 420 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 PLCB1Q9NQ66 1216 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 ITGA11Q9UKX5 1188 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 SIK3Q9Y2K2 1263 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 PTPRJQ12913 1337 aa25.45■■□□□ 1.66
TSPAN4-202ENST00000397396 ABHD14A-ACY1A0A1B0GW23 586 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 ENPP3O14638 875 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 NFICP08651 508 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 TRIM21P19474 475 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 CYP3A5P20815 502 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 PIK3CAP42336 1068 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 LMBRD2Q68DH5 695 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 AGMOQ6ZNB7 445 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 TRAPPC11Q7Z392 1133 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 RTN4RL1Q86UN2 441 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 RNF169Q8NCN4 708 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 OR5B17Q8NGF7 314 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 ZNF516Q92618 1163 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 FAM81BQ96LP2 452 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 RAB20Q9NX57 234 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 LRFN2Q9ULH4 789 aa25.44■■□□□ 1.66
TSPAN4-202ENST00000397396 ANK1P16157 1881 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 INPPL1O15357 1258 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 MEFVO15553 781 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 BAIAP3O94812 1187 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 CSF2RAP15509 400 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 ATF7P17544 494 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 TRPC3Q13507 836 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 TDRD10Q5VZ19 366 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 GLB1LQ6UWU2 654 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 PPFIBP1Q86W92 1011 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 TNS4Q8IZW8 715 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 EHBP1Q8NDI1 1231 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 CRACR2AQ9BSW2 395 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 LSM14BQ9BX40 385 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 EDEM3Q9BZQ6 932 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 INTS2Q9H0H0 1204 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 IL23AQ9NPF7 189 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 PCDHB7Q9Y5E2 793 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 SCN5AQ14524 2016 aa25.43■■□□□ 1.66
TSPAN4-202ENST00000397396 ALPK3Q96L96 1907 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 SMIM28A0A1B0GU29 152 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 PON1P27169 355 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 MLH1P40692 756 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 FPGSQ05932 587 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 KCNMA1Q12791 1236 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 WDR44Q5JSH3 913 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 NPAS4Q8IUM7 802 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 TAF4BQ92750 862 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 KLK14Q9P0G3 267 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 FBXL5Q9UKA1 691 aa25.42■■□□□ 1.66
TSPAN4-202ENST00000397396 HLA-DRAP01903 254 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 THP07101 528 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 ITGB8P26012 769 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 GSDMDP57764 484 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 NCOA4Q13772 614 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 ZBTB6Q15916 424 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 TRIM65Q6PJ69 517 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 URGCPQ8TCY9 931 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 TAS1R2Q8TE23 839 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 PPP1R9BQ96SB3 815 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 GAD1Q99259 594 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 KANSL3Q9P2N6 904 aa25.41■■□□□ 1.66
TSPAN4-202ENST00000397396 A0A1W2PQJ5 194 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 ARL5CA6NH57 179 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 ATICP31939 592 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 GRIK3Q13003 919 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms