RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CAVIN1Q6NZI2 390 aaKnown RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 TMEM173Q86WV6 379 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 LZTS1Q9Y250 596 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 NME7Q9Y5B8 376 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 SLC4A7Q9Y6M7 1214 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 NFICP08651 508 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 AKAP5P24588 427 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 STX1AQ16623 288 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 NOMO2Q5JPE7 1267 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 LRRC43Q8N309 656 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 LBHD1Q9BQE6 289 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 CHST7Q9NS84 486 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 GRXCR1A8MXD5 290 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 ITGA4P13612 1032 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 MYOGP15173 224 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 FKBP3Q00688 224 aaKnown RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 ZACNQ401N2 412 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 TWF2Q6IBS0 349 aaKnown RBP11.53□□□□□ -0.56
NUP98-205ENST00000397007 JADE1Q6IE81 842 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 C1orf127Q8N9H9 656 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 COLGALT1Q8NBJ5 622 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 PAAF1Q9BRP4 392 aa11.53□□□□□ -0.56
NUP98-205ENST00000397007 DNAJB1P25685 340 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 EPC2Q52LR7 807 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 SEZ6Q53EL9 994 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 RNPC3Q96LT9 517 aaKnown RBP11.52□□□□□ -0.56
NUP98-205ENST00000397007 UROC1Q96N76 676 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 ACAP3Q96P50 834 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 DNAJB4Q9UDY4 337 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 IRAK3Q9Y616 596 aa11.52□□□□□ -0.56
NUP98-205ENST00000397007 KIF20AO95235 890 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 CYP11A1P05108 521 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 GALTP07902 379 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 PBX1P40424 430 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 LRSAM1Q6UWE0 723 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 SAAL1Q96ER3 474 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.57
NUP98-205ENST00000397007 INTS13Q9NVM9 706 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 GDAP2Q9NXN4 497 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.57
NUP98-205ENST00000397007 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
NUP98-205ENST00000397007 ACOT2P49753 483 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 BFSP1Q12934 665 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 OR5B17Q8NGF7 314 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 OLIG1Q8TAK6 271 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 GAD1Q99259 594 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 CTNND2Q9UQB3 1225 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 CLIC2O15247 247 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 PAX3P23760 479 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 TUSC3Q13454 348 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 TDRD10Q5VZ19 366 aaKnown RBP11.51□□□□□ -0.57
NUP98-205ENST00000397007 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 MAPK8IP1Q9UQF2 711 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 SPTLC1O15269 473 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 FAM163BP0C2L3 166 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 FGFR3P22607 806 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 NR2F2P24468 414 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
NUP98-205ENST00000397007 POMGNT1Q8WZA1 660 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
NUP98-205ENST00000397007 SIX2Q9NPC8 291 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 GINS2Q9Y248 185 aa11.51□□□□□ -0.57
NUP98-205ENST00000397007 BICDL2A1A5D9 508 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 F8W810 466 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 BIN1O00499 593 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 ITGB1P05556 798 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 PRKCSHP14314 528 aaPredicted RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 SLC11A1P49279 550 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP98-205ENST00000397007 RABGGTBP53611 331 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 ZBTB33Q86T24 672 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 SPATA18Q8TC71 538 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 CNTN6Q9UQ52 1028 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 GTPBP10A4D1E9 387 aaKnown RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 H3BNC9 293 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 PSMA7O14818 248 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 PPEF2O14830 753 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 CAVIN2O95810 425 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 SCNN1GP51170 649 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 C9orf57Q5W0N0 161 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
NUP98-205ENST00000397007 RTP3Q9BQQ7 232 aa11.5□□□□□ -0.57
NUP98-205ENST00000397007 BCO2Q9BYV7 579 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms