RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 IQCEQ6IPM2 695 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 PHLDB3Q6NSJ2 640 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 PDXDC1Q6P996 788 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 SMG8Q8ND04 991 aaKnown RBP25.32■■□□□ 1.64
LDHB-203ENST00000396076 TOX2Q96NM4 488 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 MTMR12Q9C0I1 747 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 IPPQ9Y573 584 aa25.32■■□□□ 1.64
LDHB-203ENST00000396076 LRRC53A6NM62 1247 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 HLA-DRAP01903 254 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 MBTPS1Q14703 1052 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 JADE1Q6IE81 842 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 LRRC8DQ7L1W4 858 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 TRAPPC11Q7Z392 1133 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 ANKRD36BP1Q96IX9 119 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 TMEM106CQ9BVX2 250 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 NUCKS1Q9H1E3 243 aaKnown RBP25.31■■□□□ 1.64
LDHB-203ENST00000396076 DNAJC12Q9UKB3 198 aa25.31■■□□□ 1.64
LDHB-203ENST00000396076 PHACTR2O75167 634 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 NFICP08651 508 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 TMEM191BP0C7N4 346 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 CAPN2P17655 700 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 RFX1P22670 979 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 HNRNPH3P31942 346 aaKnown RBP25.3■■□□□ 1.64
LDHB-203ENST00000396076 DSC3Q14574 896 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 SNX27Q96L92 541 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 AJAP1Q9UKB5 411 aaPredicted RBP25.3■■□□□ 1.64
LDHB-203ENST00000396076 PLAGL2Q9UPG8 496 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 PCDHB2Q9Y5E7 798 aa25.3■■□□□ 1.64
LDHB-203ENST00000396076 DNAH12Q6ZR08 3092 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 DCDC2CA8MYV0 355 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 PITPNM1O00562 1244 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 ZC3H11AO75152 810 aaKnown RBP eCLIP25.29■■□□□ 1.647e-14■■□□□ 11.7
LDHB-203ENST00000396076 RECQL4O94761 1208 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 TNNC2P02585 160 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 AKAP5P24588 427 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 PIK3CAP42336 1068 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 TLE2Q04725 743 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 TRIM60Q495X7 471 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 WDR59Q6PJI9 974 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 ALKAL1Q6UXT8 129 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 ZSCAN30Q86W11 494 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 NT5DC4Q86YG4 428 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 ARHGEF19Q8IW93 802 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 SYN2Q92777 582 aaPredicted RBP25.29■■□□□ 1.64
LDHB-203ENST00000396076 TRAIPQ9BWF2 469 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 APOL6Q9BWW8 343 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 STK33Q9BYT3 514 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 RNF39Q9H2S5 420 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 C11orf49Q9H6J7 331 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 FAM105AQ9NUU6 356 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 ZNHIT6Q9NWK9 470 aaKnown RBP25.29■■□□□ 1.64
LDHB-203ENST00000396076 PYCARDQ9ULZ3 195 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 MYO6Q9UM54 1294 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 C2CD2Q9Y426 696 aa25.29■■□□□ 1.64
LDHB-203ENST00000396076 MGEA5O60502 916 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 FAAP100Q0VG06 881 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 NCOA4Q13772 614 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 MEA1Q16626 185 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 PAWRQ96IZ0 340 aaKnown RBP25.28■■□□□ 1.64
LDHB-203ENST00000396076 NT5C1BQ96P26 610 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 SPAG5Q96R06 1193 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 MCOLN1Q9GZU1 580 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 UBE2TQ9NPD8 197 aaPredicted RBP25.28■■□□□ 1.64
LDHB-203ENST00000396076 PARP2Q9UGN5 583 aa25.28■■□□□ 1.64
LDHB-203ENST00000396076 CST3P01034 146 aaPredicted RBP25.27■■□□□ 1.64
LDHB-203ENST00000396076 JAM2P57087 298 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 RAPGEF1Q13905 1077 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 TMEM132DQ14C87 1099 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 WDR44Q5JSH3 913 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 SFMBT2Q5VUG0 894 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 E4F1Q66K89 784 aaPredicted RBP25.27■■□□□ 1.64
LDHB-203ENST00000396076 TMTC1Q8IUR5 882 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 PI4K2AQ9BTU6 479 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 CXCL16Q9H2A7 254 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.27■■□□□ 1.641e-7■■■■□ 20.3
LDHB-203ENST00000396076 DERAQ9Y315 318 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 SCARA3Q6AZY7 606 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 CYP26C1Q6V0L0 522 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 KIF12Q96FN5 646 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 AIPL1Q9NZN9 384 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 CNTN3Q9P232 1028 aa25.27■■□□□ 1.64
LDHB-203ENST00000396076 ARHGAP6O43182 974 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 CDK17Q00537 523 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 DRAP1Q14919 205 aaPredicted RBP25.26■■□□□ 1.63
LDHB-203ENST00000396076 XKR4Q5GH76 650 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 MRPL10Q7Z7H8 261 aaKnown RBP25.26■■□□□ 1.63
LDHB-203ENST00000396076 HELQQ8TDG4 1101 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 TATDN2Q93075 761 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 ZMAT2Q96NC0 199 aaKnown RBP25.26■■□□□ 1.63
LDHB-203ENST00000396076 CHP1Q99653 195 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 ADAM2Q99965 735 aa25.26■■□□□ 1.63
LDHB-203ENST00000396076 IFIH1Q9BYX4 1025 aaKnown RBP25.26■■□□□ 1.63
LDHB-203ENST00000396076 ZNF623O75123 536 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 RAB27AP51159 221 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 TRPC3Q13507 836 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 GPNMBQ14956 572 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 HACE1Q8IYU2 909 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 PPM1KQ8N3J5 372 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 C1orf127Q8N9H9 656 aa25.25■■□□□ 1.63
LDHB-203ENST00000396076 ELMO3Q96BJ8 720 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms