RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SHC3Q92529 594 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 VCPIP1Q96JH7 1222 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SPACA7Q96KW9 195 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 CCDC114Q96M63 670 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 RUFY1Q96T51 708 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 ZCWPW1Q9H0M4 648 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 FZD8Q9H461 694 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 HAUS2Q9NVX0 235 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 RGL1Q9NZL6 768 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SNX12Q9UMY4 172 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 A0A0B4J269 797 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 MBLAC1A4D2B0 266 aaPredicted RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 HMGB1P1B2RPK0 211 aaPredicted RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 F8VZ95 297 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 BACH1O14867 736 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 INPPL1O15357 1258 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 KRT86O43790 486 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 ATP6V1G2O95670 118 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 UBA1P22314 1058 aaKnown RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 ADSSP30520 456 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SCTRP47872 440 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SERPINB4P48594 390 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 RWDD2BP57060 319 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 FAM178BQ8IXR5 827 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 GLIS3Q8NEA6 775 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 ATP8B4Q8TF62 1192 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 LMBR1Q8WVP7 490 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 RSRC1Q96IZ7 334 aaKnown RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 ATP6V1G3Q96LB4 118 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SEZ6LQ9BYH1 1024 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 LUC7LQ9NQ29 371 aaKnown RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 STIM2Q9P246 746 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 CNTNAP2Q9UHC6 1331 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 RCCD1A6NED2 376 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 LIN7AO14910 233 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SMNDC1O75940 238 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS41-203ENST00000395969 WEE2P0C1S8 567 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TMEM253P0C7T8 217 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 MAPK4P31152 587 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 NPTX2P47972 431 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ERVK-9P63128 1117 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CCNA1P78396 465 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ELF3P78545 371 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SP2Q02086 613 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 RIPK1Q13546 671 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 LAMC2Q13753 1193 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 AMHR2Q16671 573 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ACCSLQ4AC99 568 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLC9C1Q4G0N8 1177 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 KCTD16Q68DU8 428 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 HS2ST1Q7LGA3 356 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 XXYLT1Q8NBI6 393 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SPATA4Q8NEY3 305 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SPATA18Q8TC71 538 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SEPT1Q8WYJ6 367 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLCO2A1Q92959 643 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 AVENQ9NQS1 362 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 GDF3Q9NR23 364 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 AGPAT5Q9NUQ2 364 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 APEX2Q9UBZ4 518 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TANC1Q9C0D5 1861 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 FNDC1Q4ZHG4 1894 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 hCG_2014768A0A024R1R8 64 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 EPHB6O15197 1021 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 MAGEB2O15479 319 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TRAPPC3O43617 180 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ADCY3O60266 1144 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 DDNO94850 711 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SNUPNO95149 360 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 PAEPP09466 180 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ALAS1P13196 640 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 PECAM1P16284 738 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 GBP2P32456 591 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 MAN1A1P33908 653 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 PTPN7P35236 360 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SOX5P35711 763 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 MTIF2P46199 727 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 RPL34P49207 117 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 ARHGAP1Q07960 439 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CYP24A1Q07973 514 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CTTNQ14247 550 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLMAPQ14BN4 828 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SFMBT2Q5VUG0 894 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SPRYD7Q5W111 196 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 IQSEC1Q6DN90 963 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 BZW1Q7L1Q6 419 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 HAUS6Q7Z4H7 955 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 VSIG1Q86XK7 387 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 FAM186BQ8IYM0 893 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CXorf38Q8TB03 319 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 CCT6BQ92526 530 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 FAM210AQ96ND0 272 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 LACRTQ9GZZ8 138 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 VPS16Q9H269 839 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 RNF181Q9P0P0 153 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLC12A6Q9UHW9 1150 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 NOCTQ9UK39 431 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 TFR2Q9UP52 801 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 PCDHA13Q9Y5I0 950 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms