RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CCDC172P0C7W6 258 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 UCHL3P15374 230 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 SLC9A1P19634 815 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 KRT9P35527 623 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 FAAP100Q0VG06 881 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 TRPC3Q13507 836 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 TMEM132DQ14C87 1099 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 UBXN11Q5T124 520 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 KLHDC7AQ5VTJ3 777 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 SMYD5Q6GMV2 418 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 ENOSF1Q7L5Y1 443 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 DIS3LQ8TF46 1054 aaKnown RBP14.78□□□□□ -0.04
VAPB-202ENST00000395802 SPAG5Q96R06 1193 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 TTYH3Q9C0H2 523 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 INTS2Q9H0H0 1204 aaKnown RBP14.78□□□□□ -0.04
VAPB-202ENST00000395802 C1orf112Q9NSG2 853 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 PARP2Q9UGN5 583 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 ATP11BQ9Y2G3 1177 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 A0A0U1RQF3 1178 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 ITGA4P13612 1032 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 RFC2P35250 354 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 PIK3CAP42336 1068 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 POLR2FP61218 127 aaKnown RBP14.77□□□□□ -0.05
VAPB-202ENST00000395802 SEPT8Q92599 483 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 SNX27Q96L92 541 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 NT5C1BQ96P26 610 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.05
VAPB-202ENST00000395802 TMEM39AQ9NV64 488 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 GIT1Q9Y2X7 761 aa14.77□□□□□ -0.05
VAPB-202ENST00000395802 KIAA0100Q14667 2235 aaKnown RBP14.77□□□□□ -0.05
VAPB-202ENST00000395802 RECQL4O94761 1208 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 CLCN1P35523 988 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 KLK7P49862 253 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ADKP55263 362 aaKnown RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 SGSM1Q2NKQ1 1148 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 TRAPPC11Q7Z392 1133 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 TMEM192Q8IY95 271 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 TC2NQ8N9U0 490 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 TAF4BQ92750 862 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 FAXDC2Q96IV6 333 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ADAM2Q99965 735 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 RGS18Q9NS28 235 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ABHD10Q9NUJ1 306 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 SLC38A7Q9NVC3 462 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ITGA11Q9UKX5 1188 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 EOMESO95936 686 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 SKILP12757 684 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 FXR1P51114 621 aaKnown RBP eCLIP14.76□□□□□ -0.05
VAPB-202ENST00000395802 MFAP3P55082 362 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 NCOA4Q13772 614 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 DSC3Q14574 896 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 JADE1Q6IE81 842 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ALKAL1Q6UXT8 129 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 SLC24A5Q71RS6 500 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 MRPL10Q7Z7H8 261 aaKnown RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 SMG8Q8ND04 991 aaKnown RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 BEST2Q8NFU1 509 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 TAS1R2Q8TE23 839 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 ZNF516Q92618 1163 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 JAKMIP2Q96AA8 810 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 KIF12Q96FN5 646 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 DNAJC7Q99615 494 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 BAG1Q99933 345 aaPredicted RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 STK33Q9BYT3 514 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 MTMR12Q9C0I1 747 aa14.76□□□□□ -0.05
VAPB-202ENST00000395802 UBQLN1Q9UMX0 589 aaKnown RBP14.76□□□□□ -0.05
VAPB-202ENST00000395802 NOL4O94818 638 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 CLSTN1O94985 981 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 KCNE1P15382 129 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 TBXAS1P24557 533 aaPredicted RBP14.75□□□□□ -0.05
VAPB-202ENST00000395802 ATICP31939 592 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 GOLGA8FQ08AF8 430 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 GOLGA8DPQ0D2H9 430 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 PLEKHG4Q58EX7 1191 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 XKR4Q5GH76 650 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 LMBRD2Q68DH5 695 aaPredicted RBP14.75□□□□□ -0.05
VAPB-202ENST00000395802 RRAGAQ7L523 313 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 LMO3Q8TAP4 145 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 RSPH1Q8WYR4 309 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 RPS6KC1Q96S38 1066 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 APOL6Q9BWW8 343 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 GANQ9H2C0 597 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 TMX1Q9H3N1 280 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 PLAGL2Q9UPG8 496 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 HES2Q9Y543 173 aa14.75□□□□□ -0.05
VAPB-202ENST00000395802 HLA-DRAP01903 254 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 NFICP08651 508 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 P4HA1P13674 534 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 ATF7P17544 494 aaPredicted RBP14.74□□□□□ -0.05
VAPB-202ENST00000395802 CYP3A5P20815 502 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 AKAP5P24588 427 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 RBP5P82980 135 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms