RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ATP4AP20648 1035 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ANXA13P27216 316 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 GBP1P32455 592 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ICA1Q05084 483 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CCDC6Q16204 474 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 MUM1Q2TAK8 710 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 SPDYCQ5MJ68 293 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 IZUMO3Q5VZ72 239 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 C11orf63Q6NUN7 778 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CERKQ8TCT0 537 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 SEMA4DQ92854 862 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 RPS6KC1Q96S38 1066 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 OLFML3Q9NRN5 406 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 NAV1Q8NEY1 1877 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 KRT10P13645 584 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ADRA2BP18089 450 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 RPA3P35244 121 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 MXI1P50539 228 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 IL9RQ01113 521 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CETN1Q12798 172 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 STRN3Q13033 797 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 RASA3Q14644 834 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 MTFR1Q15390 333 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ATP13A4Q4VNC1 1196 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 TAF1BQ53T94 588 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 TMEM63BQ5T3F8 832 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ANO7Q6IWH7 933 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 CBWD2Q8IUF1 395 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 ANKMY2Q8IV38 441 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 RBM15Q96T37 977 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLIP2-203ENST00000395060 DLGAP2Q9P1A6 1054 aa15.24■□□□□ 0.03
CLIP2-203ENST00000395060 A0A1W2PPM1 405 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 DDTLA6NHG4 134 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 IFNB1P01574 187 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ARP10275 920 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ALAS1P13196 640 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 IRX1P78414 480 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 FMO1Q01740 532 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 BLMHQ13867 455 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 RNF220Q5VTB9 566 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 CDCA2Q69YH5 1023 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 TMEM154Q6P9G4 183 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 LXNQ9BS40 222 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ROPN1BQ9BZX4 212 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ROPN1Q9HAT0 212 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.23■□□□□ 0.037e-7■■■■□ 20.2
CLIP2-203ENST00000395060 PRKAG3Q9UGI9 489 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 KCNG1Q9UIX4 513 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SMCHD1A6NHR9 2005 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SPATA31A6Q5VVP1 1343 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 A0A0G2JND7 137 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 PEX11AO75192 247 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 HSPA6P17066 643 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 GAP43P17677 238 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ATP5DP30049 168 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 RFC5P40937 340 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 P3H1Q32P28 736 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 TNFAIP8L3Q5GJ75 292 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 CYFIP1Q7L576 1253 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 MAGEB18Q96M61 343 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SYT15Q9BQS2 421 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 SLC16A4O15374 487 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 GNAT1P11488 350 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 CYP3A7P24462 503 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 OTOP1Q7RTM1 612 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 RAB3IPQ96QF0 476 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 NAP1L4Q99733 375 aaKnown RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 DENND2DQ9H6A0 471 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-203ENST00000395060 RNPEPL1Q9HAU8 725 aa15.23■□□□□ 0.03
CLIP2-203ENST00000395060 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 GAS8O95995 478 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 NDUFB10O96000 172 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 CPA2P48052 419 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 CD101Q93033 1021 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 CFAP69A5D8W1 941 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 NEFHP12036 1026 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 NOVP48745 357 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-203ENST00000395060 POLE2P56282 527 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 SOX10P56693 466 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 SLC1A5Q15758 541 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 ARMC3Q5W041 872 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 CROCCP2Q86T23 111 aa15.22■□□□□ 0.03
CLIP2-203ENST00000395060 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms