RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ZSWIM1Q9BR11 485 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 C15orf41Q9Y2V0 281 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 KIAA0391O15091 583 aaKnown RBP16.61■□□□□ 0.25
PTBP1-204ENST00000394601 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-204ENST00000394601 CYP1A2P05177 515 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 CHN1P15882 459 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 GPC3P51654 580 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 GPC5P78333 572 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 MXRA7P84157 204 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 SAMD3Q8N6K7 520 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 CCDC26Q8TAB7 109 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 ERP44Q9BS26 406 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-204ENST00000394601 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 CYP26A1O43174 497 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 CNGA1P29973 690 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 MXI1P50539 228 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-204ENST00000394601 C6orf89Q6UWU4 347 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 C18orf8Q96DM3 657 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF570Q96NI8 536 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 OSBPL1AQ9BXW6 950 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■□□□ 12.2
PTBP1-204ENST00000394601 VWA5AO00534 786 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 GDAP1Q8TB36 358 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 LRRC45Q96CN5 670 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 FAM114A2Q9NRY5 505 aa16.61■□□□□ 0.25
PTBP1-204ENST00000394601 GOLGA6L10A0A0M3HER8 536 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 UBOX5O94941 541 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 COMTP21964 271 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 DRG2P55039 364 aaKnown RBP16.6■□□□□ 0.25
PTBP1-204ENST00000394601 VSIG10LQ86VR7 867 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 VTI1AQ96AJ9 217 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 CHMP6Q96FZ7 201 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 RMDN3Q96TC7 470 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 KCNK9Q9NPC2 374 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.255e-7■■■■■ 80.5
PTBP1-204ENST00000394601 DNAJC17Q9NVM6 304 aaKnown RBP16.6■□□□□ 0.25
PTBP1-204ENST00000394601 NOP53Q9NZM5 478 aaKnown RBP16.6■□□□□ 0.25
PTBP1-204ENST00000394601 PCYOX1Q9UHG3 505 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 AGAP1Q9UPQ3 857 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 CCT8L1PA6NM43 557 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 PYGMP11217 842 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 GNAT1P11488 350 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 CYP11B1P15538 503 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 KCNA2P16389 499 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 DR1Q01658 176 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 MTMR2Q13614 643 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 CYP1B1Q16678 543 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 C15orf39Q6ZRI6 1047 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
PTBP1-204ENST00000394601 BTBD6Q96KE9 485 aa16.6■□□□□ 0.25
PTBP1-204ENST00000394601 WDR64B1ANS9 1081 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 PYGLP06737 847 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 ALDH5A1P51649 535 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 JAK3P52333 1124 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF568Q3ZCX4 644 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 SPDYCQ5MJ68 293 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 JAMLQ86YT9 394 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 C3orf20Q8ND61 904 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 TAS1R2Q8TE23 839 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.251e-8■■■■■ 28.9
PTBP1-204ENST00000394601 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 WNT7BP56706 349 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 FAM102BQ5T8I3 360 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■■□□□ 14.2
PTBP1-204ENST00000394601 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 FAM84AQ96KN4 292 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 TSC22D3Q99576 134 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 ADAMTS5Q9UNA0 930 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 A0A1B0GVG6 124 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 SRRM3A6NNA2 597 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 SFNP31947 248 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 TNIP1Q15025 636 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF516Q92618 1163 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 DHX38Q92620 1227 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 TMEM8AQ9HCN3 771 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
PTBP1-204ENST00000394601 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
PTBP1-204ENST00000394601 MIF4GDA9UHW6 222 aaKnown RBP16.58■□□□□ 0.24
PTBP1-204ENST00000394601 PHF2O75151 1096 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
PTBP1-204ENST00000394601 PLTPP55058 493 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 CLDN10P78369 228 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 DHX34Q14147 1143 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms