RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TNFAIP2Q03169 654 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 CTDSPL2Q05D32 466 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 DCAF15Q66K64 600 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ULK3Q6PHR2 472 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 HAVCR1Q96D42 359 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 TTC3P53804 2025 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 RPN2P04844 631 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 KCNK10P57789 538 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 CCDC137Q6PK04 289 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 UXS1Q8NBZ7 420 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 EXTL3O43909 919 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 GPC5P78333 572 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ARF5P84085 180 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 PDIA2Q13087 525 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 NRDE2Q9H7Z3 1164 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 SH3BP4Q9P0V3 963 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP49-203ENST00000394253 hCG_1984214I3L0E3 225 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 BTKQ06187 659 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ZSWIM7Q19AV6 140 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 TRIM65Q6PJ69 517 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 FBXO11Q86XK2 927 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 FAM9CQ8IZT9 166 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 EYA2O00167 538 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 MDH1P40925 334 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 PPARAQ07869 468 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 WNK4Q96J92 1243 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ZNF577Q9BSK1 485 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ETAA1Q9NY74 926 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 M0R2C6 588 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 CCDC166P0CW27 439 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 FEN1P39748 380 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 GPATCH4Q5T3I0 446 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 CDC73Q6P1J9 531 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 MXD3Q9BW11 206 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 NUP85Q9BW27 656 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 PLEKHA5Q9HAU0 1116 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 YY1P25490 414 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ABCC1P33527 1531 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 CDKL3Q8IVW4 592 aaPredicted RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 AGR3Q8TD06 166 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 PSMC3IPQ9P2W1 217 aaPredicted RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 NESP48681 1621 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 UBA6A0AVT1 1052 aaPredicted RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 ZBTB39O15060 712 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 PPP1R37O75864 691 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 GYS1P13807 737 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TUBA3CQ13748 450 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ABHD10Q9NUJ1 306 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 RIC8BQ9NVN3 520 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ADAM22Q9P0K1 906 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TRIM49BA6NDI0 452 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TRIM49D1C9J1S8 452 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 LLGL1Q15334 1064 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 MZT2BQ6NZ67 158 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 C8orf4Q9NR00 106 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 CEP72Q9P209 647 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 STAP1Q9ULZ2 295 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TUBA4AP68366 448 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ALDH6A1Q02252 535 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 MTFR1Q15390 333 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 ASPRV1Q53RT3 343 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 CYP4Z1Q86W10 505 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 MB21D1Q8N884 522 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 RIN3Q8TB24 985 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TSEN34Q9BSV6 310 aaKnown RBP14.05□□□□□ -0.16
USP49-203ENST00000394253 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 RGS18Q9NS28 235 aa14.05□□□□□ -0.16
USP49-203ENST00000394253 TRPC5OSA6NMA1 111 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 KLRF2D3W0D1 207 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 HIST1H2AGP0C0S8 130 aaPredicted RBP14.04□□□□□ -0.16
USP49-203ENST00000394253 HIST1H2ADP20671 130 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 PPP3CCP48454 512 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 AKIRIN2Q53H80 203 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 HIST1H2AHQ96KK5 128 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 HIST1H2AJQ99878 128 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 H2AFJQ9BTM1 129 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 MOSPD1Q9UJG1 213 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 TMCC3Q9ULS5 477 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 ANKRD65E5RJM6 399 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 AIM2O14862 343 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SPAG6O75602 509 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 RASA1P20936 1047 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 CASP4P49662 377 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms