RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ALS2CR12Q96Q35 445 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 TLR10Q9BXR5 811 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 GINS2Q9Y248 185 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 ANO9A1A5B4 782 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 MYADML2A6NDP7 307 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 MMEP08473 750 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 KRT5P13647 590 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 GCNT1Q02742 428 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 MFSD10Q14728 455 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PTPROQ16827 1216 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 WDR44Q5JSH3 913 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 TEX35Q5T0J7 233 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 IFNLR1Q8IU57 520 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-203ENST00000394181 UBXN4Q92575 508 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 SCLT1Q96NL6 688 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 MMS19Q96T76 1030 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PDZD7Q9H5P4 517 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 C1orf112Q9NSG2 853 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PACSIN2Q9UNF0 486 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-203ENST00000394181 NUB1Q9Y5A7 615 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PDE2AO00408 941 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PHACTR2O75167 634 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 CXCL8P10145 99 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 CYP11B1P15538 503 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 NOP2P46087 812 aaKnown RBP20.51■□□□□ 0.87
CLDND1-203ENST00000394181 NCOA4Q13772 614 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 FAM187BQ17R55 369 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 WHAMMP3Q1A5X7 153 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 EFCAB13Q8IY85 973 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 VTI1AQ96AJ9 217 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 ARHGEF26Q96DR7 871 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 MAP7D2Q96T17 732 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 SNX12Q9UMY4 172 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
CLDND1-203ENST00000394181 BTNL10A8MVZ5 291 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 ZC3H11AO75152 810 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLDND1-203ENST00000394181 TRIM32Q13049 653 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 FMNL3Q8IVF7 1028 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 ADAMTS10Q9H324 1103 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 OSGEPQ9NPF4 335 aa20.5■□□□□ 0.87
CLDND1-203ENST00000394181 ZSCAN20P17040 1043 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-203ENST00000394181 DNA2P51530 1060 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 TFAMQ00059 246 aaKnown RBP20.49■□□□□ 0.87
CLDND1-203ENST00000394181 FMO1Q01740 532 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 WDR49Q8IV35 697 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 DDX1Q92499 740 aaKnown RBP20.49■□□□□ 0.87
CLDND1-203ENST00000394181 TRIB2Q92519 343 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 AP5M1Q9H0R1 490 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 THAP2Q9H0W7 228 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 CHORDC1Q9UHD1 332 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-203ENST00000394181 ZEB2O60315 1214 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 TSPAN1O60635 241 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
CLDND1-203ENST00000394181 FLT3LGP49771 235 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 PSEN2P49810 448 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 MYL6P60660 151 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 IRF5Q13568 498 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 CEP112Q8N8E3 955 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 SMARCAL1Q9NZC9 954 aa20.49■□□□□ 0.87
CLDND1-203ENST00000394181 RRN3P2A6NIE6 340 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 GPR32O75388 356 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 FTLP02792 175 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-203ENST00000394181 STAG3L1P0CL83 205 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 LACTBP83111 547 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-203ENST00000394181 FSCN1Q16658 493 aaKnown RBP20.48■□□□□ 0.87
CLDND1-203ENST00000394181 CREG2Q8IUH2 290 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 EHD2Q9NZN4 543 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 HAS3O00219 553 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 TREHO43280 583 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 CLSTN1O94985 981 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 CPT1AP50416 773 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 NOP14P78316 857 aaKnown RBP20.48■□□□□ 0.87
CLDND1-203ENST00000394181 CUL2Q13617 745 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 DUOXA2Q1HG44 320 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 LRRC57Q8N9N7 239 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 NOA1Q8NC60 698 aaKnown RBP20.48■□□□□ 0.87
CLDND1-203ENST00000394181 TPCN2Q8NHX9 752 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 HHIPL1Q96JK4 782 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 OSBPL9Q96SU4 736 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 INTUQ9ULD6 942 aa20.48■□□□□ 0.87
CLDND1-203ENST00000394181 LACTBL1A8MY62 500 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 CYP2C9P11712 490 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 FCGRTP55899 365 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 ADAM17P78536 824 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 PRKCZQ05513 592 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 HSP90AA2PQ14568 343 aaPredicted RBP20.47■□□□□ 0.87
CLDND1-203ENST00000394181 SLC35G2Q8TBE7 412 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 GOLGA1Q92805 767 aa20.47■□□□□ 0.87
CLDND1-203ENST00000394181 RPF1Q9H9Y2 349 aaKnown RBP20.47■□□□□ 0.87
CLDND1-203ENST00000394181 MBLAC1A4D2B0 266 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-203ENST00000394181 NFICP08651 508 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 CLTAP09496 248 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 TMEM253P0C7T8 217 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 CDR2Q01850 454 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 MEI1Q5TIA1 1274 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 FBXO38Q6PIJ6 1188 aa20.46■□□□□ 0.87
CLDND1-203ENST00000394181 ENOSF1Q7L5Y1 443 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms