RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
KRT41P-201ENST00000393988 UPP1Q16831 310 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 SEZ6Q53EL9 994 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
KRT41P-201ENST00000393988 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 GPR152Q8TDT2 470 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 ZBTB45Q96K62 511 aaPredicted RBP13.14□□□□□ -0.31
KRT41P-201ENST00000393988 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 RPP25Q9BUL9 199 aaKnown RBP13.14□□□□□ -0.31
KRT41P-201ENST00000393988 TMEM134Q9H6X4 195 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
KRT41P-201ENST00000393988 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 ANKFY1Q9P2R3 1169 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 NUMBLQ9Y6R0 609 aa13.14□□□□□ -0.31
KRT41P-201ENST00000393988 NPHP3-ACAD11A0A0J9YXS1 232 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 XYLBO75191 536 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 SRFP11831 508 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 FGFR3P22607 806 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 GJB2P29033 226 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 PRPHP41219 470 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 STRN3Q13033 797 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 MAPK7Q13164 816 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 HTR4Q13639 388 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 RAB33AQ14088 237 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 RILPL1Q5EBL4 403 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 PARM1Q6UWI2 310 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 FRMD5Q7Z6J6 570 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 C3orf58Q8NDZ4 430 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 ITFG1Q8TB96 612 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 C18orf25Q96B23 403 aaPredicted RBP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 UROC1Q96N76 676 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 TBC1D17Q9HA65 648 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 ARHGAP28Q9P2N2 729 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
KRT41P-201ENST00000393988 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
KRT41P-201ENST00000393988 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 PODXLO00592 558 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 MCF2P10911 925 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
KRT41P-201ENST00000393988 MPZL3Q6UWV2 235 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 ASCL5Q7RTU5 278 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 FGF13Q92913 245 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 NXPE3Q969Y0 559 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
KRT41P-201ENST00000393988 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 MYH11P35749 1972 aa13.12□□□□□ -0.31
KRT41P-201ENST00000393988 PTPRZ1P23471 2315 aaPredicted RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 PAPLNO95428 1278 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 PLS3P13797 630 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 SMTNP53814 917 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 GPC5P78333 572 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 SPAG1Q07617 926 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 ANGPT1Q15389 498 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 TMEM130Q8N3G9 435 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 FGF14Q92915 247 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 BICD1Q96G01 975 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 SNX27Q96L92 541 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 KXD1Q9BQD3 176 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
KRT41P-201ENST00000393988 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
KRT41P-201ENST00000393988 CITO14578 2027 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 PRRG1O14668 218 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 ELF1P32519 619 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 MCM4P33991 863 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
KRT41P-201ENST00000393988 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 XKR4Q5GH76 650 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 SYT2Q8N9I0 419 aaPredicted RBP13.1□□□□□ -0.31
KRT41P-201ENST00000393988 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
KRT41P-201ENST00000393988 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms