RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PIK3R5Q8WYR1 880 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 FGF14Q92915 247 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 TUFT1Q9NNX1 390 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 DLGAP2Q9P1A6 1054 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 MTCL1Q9Y4B5 1905 aaKnown RBP20.47■□□□□ 0.87
SNCB-202ENST00000393693 N4BP3O15049 544 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 SPTLC2O15270 562 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 CCL16O15467 120 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 GADD45BO75293 160 aaPredicted RBP20.47■□□□□ 0.87
SNCB-202ENST00000393693 PRKCBP05771 671 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 THP07101 528 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 C8AP07357 584 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 GPC5P78333 572 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 PRPF4BQ13523 1007 aaKnown RBP20.47■□□□□ 0.87
SNCB-202ENST00000393693 PHLDB3Q6NSJ2 640 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 DCLRE1AQ6PJP8 1040 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 LINC00301Q8NCQ3 95 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 NACC1Q96RE7 527 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 FOXQ1Q9C009 403 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 SLC2A4RGQ9NR83 387 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 POLIQ9UNA4 740 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 SIT1Q9Y3P8 196 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 CLIC4Q9Y696 253 aa20.47■□□□□ 0.87
SNCB-202ENST00000393693 LRRN2O75325 713 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 ME1P48163 572 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 SLC39A14Q15043 492 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 PPM1LQ5SGD2 360 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 LIN9Q5TKA1 542 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 PADI6Q6TGC4 694 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 ITFG1Q8TB96 612 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 GPT2Q8TD30 523 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 POLR3CQ9BUI4 534 aaPredicted RBP20.46■□□□□ 0.87
SNCB-202ENST00000393693 KIFC3Q9BVG8 833 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 CCDC113Q9H0I3 377 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 C2orf40Q9H1Z8 148 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 CDH7Q9ULB5 785 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 GDAQ9Y2T3 454 aa20.46■□□□□ 0.87
SNCB-202ENST00000393693 PPP6R2O75170 966 aa20.45■□□□□ 0.86
SNCB-202ENST00000393693 GLULP15104 373 aa20.45■□□□□ 0.86
SNCB-202ENST00000393693 ID4P47928 161 aa20.45■□□□□ 0.86
SNCB-202ENST00000393693 MAPK6Q16659 721 aa20.45■□□□□ 0.86
SNCB-202ENST00000393693 DOCK6Q96HP0 2047 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 ARHGEF35A5YM69 484 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 ACKR2O00590 384 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 HNRNPA1P09651 372 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNCB-202ENST00000393693 CYP11B2P19099 503 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 FOXK2Q01167 660 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 ZNF174Q15697 407 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 GLRA4Q5JXX5 417 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 RSPO2Q6UXX9 243 aaPredicted RBP20.44■□□□□ 0.86
SNCB-202ENST00000393693 DEPTORQ8TB45 409 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 SLC7A14Q8TBB6 771 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 FGF13Q92913 245 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 ADPGKQ9BRR6 497 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 HCFC1R1Q9NWW0 138 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 ZFP37Q9Y6Q3 630 aaPredicted RBP20.44■□□□□ 0.86
SNCB-202ENST00000393693 TCHHQ07283 1943 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 COL4A3Q01955 1670 aa20.44■□□□□ 0.86
SNCB-202ENST00000393693 LMNAP02545 664 aaKnown RBP20.43■□□□□ 0.86
SNCB-202ENST00000393693 SP9P0CG40 484 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 OR1D2P34982 312 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 NAMPTP43490 491 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
SNCB-202ENST00000393693 ECM1Q16610 540 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 TTC38Q5R3I4 469 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 AXDND1Q5T1B0 1012 aaPredicted RBP20.43■□□□□ 0.86
SNCB-202ENST00000393693 NT5DC1Q5TFE4 455 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 ADALQ6DHV7 355 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 CD300LGQ6UXG3 332 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 C1orf210Q8IVY1 113 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 MORC2Q9Y6X9 1032 aaPredicted RBP20.43■□□□□ 0.86
SNCB-202ENST00000393693 GVINP1Q7Z2Y8 2422 aa20.43■□□□□ 0.86
SNCB-202ENST00000393693 A0A1W2PQ27 194 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 A0A1W2PQ64 194 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 A0A1W2PQD8 194 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 FGFR3P22607 806 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 RPA1P27694 616 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 TOB1P50616 345 aaPredicted RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 CLCNKBP51801 687 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 STARD6P59095 220 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 ELAVL2Q12926 359 aaKnown RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 RAB33AQ14088 237 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 PJA1Q8NG27 643 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 GOLGA2P5Q9HBQ8 144 aa20.42■□□□□ 0.86
SNCB-202ENST00000393693 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 DNMT3BQ9UBC3 853 aaKnown RBP20.42■□□□□ 0.86
SNCB-202ENST00000393693 DCHS1Q96JQ0 3298 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 I3L4J1 428 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 CUTAO60888 179 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 XYLBO75191 536 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 B3GAT3O94766 335 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 OR52Z1P0C646 297 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 HOXA9P31269 272 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 PTPAQ15257 358 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 CCDC73Q6ZRK6 1079 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 ERMNQ8TAM6 284 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 PPP1R10Q96QC0 940 aaKnown RBP20.41■□□□□ 0.86
SNCB-202ENST00000393693 KXD1Q9BQD3 176 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms