RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ALKAL1Q6UXT8 129 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 CCDC65Q8IXS2 484 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 C12orf76Q8N812 135 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 FSIP1Q8NA03 581 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM212AQ96EL1 285 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 SAAL1Q96ER3 474 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 PAGE5Q96GU1 130 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM84AQ96KN4 292 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 HERC2P3Q9BVR0 1158 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 COLEC11Q9BWP8 271 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 STRA6Q9BX79 667 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 CUEDC2Q9H467 287 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ST6GALNAC4Q9H4F1 302 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 TOPORSQ9NS56 1045 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 SEL1LQ9UBV2 794 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADAM28Q9UKQ2 775 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 A0A0B4J269 797 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 GOLGA8IPA6NC78 632 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 GOLGA8JA6NMD2 632 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 LACTBL1A8MY62 500 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 PODXLO00592 558 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 OGTO15294 1046 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 LILRB3O75022 631 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 URODP06132 367 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 NFICP08651 508 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 WEE2P0C1S8 567 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADSSP30520 456 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 BRCC3P46736 316 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 GLUD2P49448 558 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 WNT7BP56706 349 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 NUCB2P80303 420 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 KCNC3Q14003 757 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 UPP1Q16831 310 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 XKR4Q5GH76 650 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM171A1Q5VUB5 890 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 CD300LGQ6UXG3 332 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 CEP57Q86XR8 500 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 CEP57L1Q8IYX8 460 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 SYCP3Q8IZU3 236 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 NOC3LQ8WTT2 800 aaKnown RBP8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 RIN2Q8WYP3 895 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 POMGNT1Q8WZA1 660 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 KCNN1Q92952 543 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 KIF12Q96FN5 646 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 MSLNLQ96KJ4 702 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 KLHL5Q96PQ7 755 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 ACCSQ96QU6 501 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 CBWD1Q9BRT8 395 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 SCAND2PQ9GZW5 306 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 PCIF1Q9H4Z3 704 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 OLFML3Q9NRN5 406 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 MRPL17Q9NRX2 175 aaKnown RBP8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 CD207Q9UJ71 328 aa8.36□□□□□ -1.07
HMGB3P1-201ENST00000393368 SF3B1O75533 1304 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 TTC26A0AVF1 554 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 PPEF2O14830 753 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 TEX28O15482 410 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADAM12O43184 909 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 MBTPS2O43462 519 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 NCK2O43639 380 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 KLRC4O43908 158 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 B3GAT3O94766 335 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 CLTAP09496 248 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SLFN14P0C7P3 912 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SPATA31D3P0C874 917 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 KCNE1P15382 129 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 KLRC2P26717 231 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 TKTP29401 623 aaKnown RBP8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 HOXD13P35453 343 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SYKP43405 635 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 AMPD3Q01432 767 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 DSG1Q02413 1049 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM26FQ5R3K3 315 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 KIAA1841Q6NSI8 718 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 CRELD2Q6UXH1 353 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SPATA31D4Q6ZUB0 917 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 UNC13DQ70J99 1090 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 PALB2Q86YC2 1186 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 NELFCDQ8IXH7 590 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 TMEM87AQ8NBN3 555 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 SLC22A17Q8WUG5 538 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 HVCN1Q96D96 273 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM213AQ9BRX8 229 aa8.35□□□□□ -1.07
HMGB3P1-201ENST00000393368 LRRC27Q9C0I9 530 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms