RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 RBM19Q9Y4C8 960 aaKnown RBP13.57□□□□□ -0.24
CTSC-202ENST00000393301 F5P12259 2224 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 H0Y858 1186 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 GFRA3O60609 400 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 KCNE1P15382 129 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 RPL17P18621 184 aaKnown RBP13.56□□□□□ -0.24
CTSC-202ENST00000393301 GBP2P32456 591 aaPredicted RBP13.56□□□□□ -0.24
CTSC-202ENST00000393301 DDIT3P35638 169 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 NPTX2P47972 431 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 ARL6IP4Q66PJ3 421 aaKnown RBP13.56□□□□□ -0.24
CTSC-202ENST00000393301 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 SPIRE2Q8WWL2 714 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 DRC1Q96MC2 740 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 KIFC3Q9BVG8 833 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 CDT1Q9H211 546 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 MFSD1Q9H3U5 465 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
CTSC-202ENST00000393301 FAM86C1Q9NVL1 165 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 KCNH3Q9ULD8 1083 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 PCDHB6Q9Y5E3 794 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
CTSC-202ENST00000393301 DMXL1Q9Y485 3027 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 PRR23AA6NEV1 266 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 K7ERI5 159 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 SLC26A4O43511 780 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 NARSO43776 548 aaKnown RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 TBC1D4O60343 1298 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 C8AP07357 584 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 MCF2P10911 925 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 ATP2C1P98194 919 aaPredicted RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 DMP1Q13316 513 aaPredicted RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 NBR1Q14596 966 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 IL17AQ16552 155 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 LIN9Q5TKA1 542 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 SLC8B1Q6J4K2 584 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 RINT1Q6NUQ1 792 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 SIX5Q8N196 739 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 DDX27Q96GQ7 796 aaKnown RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 SNX27Q96L92 541 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 MRPL4Q9BYD3 311 aaKnown RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
CTSC-202ENST00000393301 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 KCND2Q9NZV8 630 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 KCNG1Q9UIX4 513 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
CTSC-202ENST00000393301 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 SYN3O14994 580 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 ADAM12O43184 909 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 TRAPPC3O43617 180 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 PI15O43692 258 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 HIP1RO75146 1068 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 XYLBO75191 536 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 B3GAT3O94766 335 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 FSHRP23945 695 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
CTSC-202ENST00000393301 MRPL58Q14197 206 aaKnown RBP13.54□□□□□ -0.24
CTSC-202ENST00000393301 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 ANKS3Q6ZW76 656 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 KCNK18Q7Z418 384 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 CEP120Q8N960 986 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 HASPINQ8TF76 798 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
CTSC-202ENST00000393301 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
CTSC-202ENST00000393301 PIDD1Q9HB75 910 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 FBXL21Q9UKT6 434 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
CTSC-202ENST00000393301 PATJQ8NI35 1801 aa13.54□□□□□ -0.24
CTSC-202ENST00000393301 CEP250Q9BV73 2442 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 E9PMD0 336 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 ABLIM3O94929 683 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
CTSC-202ENST00000393301 SCP2P22307 547 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 CLCNKBP51801 687 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 PEX3P56589 373 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 STARD6P59095 220 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
CTSC-202ENST00000393301 RESTQ13127 1097 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 TMEM132AQ24JP5 1023 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 PPM1LQ5SGD2 360 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 MPZL3Q6UWV2 235 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 RSPO2Q6UXX9 243 aaPredicted RBP13.53□□□□□ -0.24
CTSC-202ENST00000393301 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
CTSC-202ENST00000393301 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms