RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 HSF5Q4G112 596 aaPredicted RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 FKBP1CQ5VVH2 108 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 OTOP1Q7RTM1 612 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 KBTBD2Q8IY47 623 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ZNF536O15090 1300 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 MIF4GDA9UHW6 222 aaKnown RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 AP1G2O75843 785 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 BRAFP15056 766 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 PTDSS1P48651 473 aaKnown RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ITGA8P53708 1063 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 KRT17Q04695 432 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ADCY1Q08828 1119 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 KHDC1Q4VXA5 237 aaKnown RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ETNK1Q9HBU6 452 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 TBX3O15119 743 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 TYROBPO43914 113 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 CBX6O95503 412 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 GGPS1O95749 300 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 FDX1P10109 184 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 EPHB2P29323 1055 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 GCKP35557 465 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 CRKP46108 304 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 SLC9A9Q8IVB4 645 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 RHOT2Q8IXI1 618 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 GBP7Q8N8V2 638 aaPredicted RBP12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ANKRD42Q8N9B4 389 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 MZB1Q8WU39 189 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 STARD13Q9Y3M8 1113 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ARID2Q68CP9 1835 aa12.19□□□□□ -0.46
PDCD4-202ENST00000393104 ENTPD3O75355 529 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 PSMD10O75832 226 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 PEX19P40855 299 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 MESDQ14696 234 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 ZNF333Q96JL9 665 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 NAP1L3Q99457 506 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 OSBPL1AQ9BXW6 950 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 SYNPO2Q9UMS6 1093 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 DNM3Q9UQ16 869 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 PAPPA2Q9BXP8 1791 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 CYP1A1P04798 512 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 POLGP54098 1239 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 GPC5P78333 572 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 BFSP1Q12934 665 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 FASTKD3Q14CZ7 662 aaKnown RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 UMODL1Q5DID0 1318 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 RNF207Q6ZRF8 634 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 TRABD2AQ86V40 505 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 AZIN2Q96A70 460 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 PTCD3Q96EY7 689 aaKnown RBP12.18□□□□□ -0.46
PDCD4-202ENST00000393104 WNT8AQ9H1J5 351 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 KCNK13Q9HB14 408 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
PDCD4-202ENST00000393104 AOC3Q16853 763 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 DOK7Q18PE1 504 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 CDC42EP5Q6NZY7 148 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 KIAA0825Q8IV33 1275 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 ERP27Q96DN0 273 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 PCDHA1Q9Y5I3 950 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 TMEM110-MUSTN1A8MSY1 372 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 NPTXRO95502 500 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 HSPA6P17066 643 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 CTCFP49711 727 aaPredicted RBP12.17□□□□□ -0.46
PDCD4-202ENST00000393104 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 MKL1Q969V6 931 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 SAAL1Q96ER3 474 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 TBK1Q9UHD2 729 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 GOLGA6L10A0A0M3HER8 536 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
PDCD4-202ENST00000393104 SP100P23497 879 aaPredicted RBP12.17□□□□□ -0.46
PDCD4-202ENST00000393104 NFIAQ12857 509 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 DNAJC3Q13217 504 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 TRIP13Q15645 432 aaPredicted RBP12.17□□□□□ -0.46
PDCD4-202ENST00000393104 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 RNF220Q5VTB9 566 aa12.17□□□□□ -0.46
PDCD4-202ENST00000393104 CES4AQ5XG92 561 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms