RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 UBE2OQ9C0C9 1292 aaKnown RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 INTS13Q9NVM9 706 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 LRRIQ3A6PVS8 624 aaPredicted RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 PIRO00625 290 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 EXOC3O60645 756 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 ISM2Q6H9L7 571 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 TAF4BQ92750 862 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
USP44-202ENST00000393091 CXCL8P10145 99 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 ATP2A2P16615 1042 aaKnown RBP14.38□□□□□ -0.11
USP44-202ENST00000393091 VAMP7P51809 220 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 WNT7BP56706 349 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 TUSC3Q13454 348 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 LRRC52Q8N7C0 313 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 SRRTQ9BXP5 876 aaKnown RBP14.38□□□□□ -0.11
USP44-202ENST00000393091 CBX8Q9HC52 389 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 N4BP1O75113 896 aaKnown RBP14.38□□□□□ -0.11
USP44-202ENST00000393091 ATICP31939 592 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 ZNF165P49910 485 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 RAB30Q15771 203 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 EFCAB13Q8IY85 973 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 TCHPQ9BT92 498 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 TBC1D13Q9NVG8 400 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 MIOSQ9NXC5 875 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 LRFN2Q9ULH4 789 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 LZTS1Q9Y250 596 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 ACOT2P49753 483 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 ZACNQ401N2 412 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 CD300LGQ6UXG3 332 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 SAAL1Q96ER3 474 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 TMEM8AQ9HCN3 771 aa14.38□□□□□ -0.11
USP44-202ENST00000393091 MEIS3P2A8K0S8 358 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 THP07101 528 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 CYP2J2P51589 502 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 MIIPQ5JXC2 388 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
USP44-202ENST00000393091 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 ARMCX3Q9UH62 379 aaPredicted RBP14.37□□□□□ -0.11
USP44-202ENST00000393091 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 PATJQ8NI35 1801 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP44-202ENST00000393091 RB1P06400 928 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 TMEM132DQ14C87 1099 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 UPP1Q16831 310 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 FAM109BQ6ICB4 259 aaPredicted RBP14.37□□□□□ -0.11
USP44-202ENST00000393091 SARM1Q6SZW1 724 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 THNSL1Q8IYQ7 743 aa14.37□□□□□ -0.11
USP44-202ENST00000393091 LAG3P18627 525 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 MLH1P40692 756 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 MAN2A1Q16706 1144 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 UVSSAQ2YD98 709 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 DPY19L2P1Q6NXN4 242 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 CDR2LQ86X02 465 aaPredicted RBP14.36□□□□□ -0.11
USP44-202ENST00000393091 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
USP44-202ENST00000393091 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 PTPRJQ12913 1337 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 AKAP5P24588 427 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 PNPLA4P41247 253 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 ERVK-21P61565 698 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 DUOXA2Q1HG44 320 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 TMEM132AQ24JP5 1023 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 LPPQ93052 612 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 HES2Q9Y543 173 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 UBE3AQ05086 875 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 EPC2Q52LR7 807 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 DCLRE1AQ6PJP8 1040 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 BEST2Q8NFU1 509 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 GAD1Q99259 594 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
USP44-202ENST00000393091 PTPRDP23468 1912 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 PAPLNO95428 1278 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 FGFR1P11362 822 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 KRT13P13646 458 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 LMO3Q8TAP4 145 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 OXCT2Q9BYC2 517 aaPredicted RBP14.35□□□□□ -0.11
USP44-202ENST00000393091 NRDE2Q9H7Z3 1164 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 FBXL5Q9UKA1 691 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 M0QZQ0 153 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 MATR3P43243 847 aaKnown RBP eCLIP14.35□□□□□ -0.11
USP44-202ENST00000393091 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 KLHL10Q6JEL2 608 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 JAKMIP2Q96AA8 810 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 SCN1AP35498 2009 aa14.35□□□□□ -0.11
USP44-202ENST00000393091 CAPN15O75808 1086 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms