RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PHACTR2O75167 634 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 SGPL1O95470 568 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 PRLRP16471 622 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NAP1L1P55209 391 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 BEX3Q00994 111 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NCOA4Q13772 614 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NAA30Q147X3 362 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 IFI16Q16666 785 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TRIB2Q92519 343 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 RPF1Q9H9Y2 349 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 GABRQQ9UN88 632 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TRIP12Q14669 1992 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NCANO14594 1321 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 KPNA6O60684 536 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 GPR32O75388 356 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 ERLIN2O94905 339 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CLTAP09496 248 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CYP2C9P11712 490 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CYP11B1P15538 503 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 FLT3LGP49771 235 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 PDE6CP51160 858 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 GALCP54803 685 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CUL2Q13617 745 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 PCBP1Q15365 356 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 SLC47A2Q86VL8 602 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CDR2LQ86X02 465 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 RPUSD2Q8IZ73 545 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 CEP120Q8N960 986 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 MTMR12Q9C0I1 747 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 SNX12Q9UMY4 172 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 A0A1B0GUA9 196 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CHRNB2P17787 502 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 HOXC8P31273 242 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 GJA9P57773 515 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CDR2Q01850 454 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 SPOPLQ6IQ16 392 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 RSRC2Q7L4I2 434 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 GCOM2Q9BZD3 368 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 IMPG2Q9BZV3 1241 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 V9GYY5 206 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CITO14578 2027 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 AOC2O75106 756 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 PALMO75781 387 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 STAG3L1P0CL83 205 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CXCL8P10145 99 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 GZMAP12544 262 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 OSTNP61366 133 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 NKX3-2P78367 333 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 HIC1Q14526 733 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ELF2Q15723 593 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 KIZQ2M2Z5 673 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 DEFB115Q30KQ5 88 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 UBXN4Q92575 508 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CAPNS2Q96L46 248 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 ARID3AQ99856 593 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 FAM49AQ9H0Q0 323 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 CENPFP49454 3210 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
SMARCAL1-203ENST00000392128 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TNNC2P02585 160 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TMEM191BP0C7N4 346 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 KRT5P13647 590 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 ACO1P21399 889 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 BPIFB4P59827 614 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TUBB4BP68371 445 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 FMO1Q01740 532 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 PRKCZQ05513 592 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 CTNNBL1Q8WYA6 563 aaPredicted RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 GOLGA1Q92805 767 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms