RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DOK3Q7L591 496 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF804AQ7Z570 1209 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 LRRTM1Q86UE6 522 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM83AQ86UY5 434 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM72BQ86X60 149 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ANKRD13BQ86YJ7 626 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KIAA0825Q8IV33 1275 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SFTPA1Q8IWL2 248 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KLHDC8BQ8IXV7 354 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 COLGALT2Q8IYK4 626 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MMP21Q8N119 569 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 LYPD1Q8N2G4 141 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 LNX2Q8N448 690 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ANKRD53Q8N9V6 530 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 C8orf58Q8NAV2 365 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 OR10H5Q8NGA6 315 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 WDR48Q8TAF3 677 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FGFBP3Q8TAT2 258 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC7A14Q8TBB6 771 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 HELQQ8TDG4 1101 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TAS1R2Q8TE23 839 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ANKRD24Q8TF21 1146 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ASB5Q8WWX0 329 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAMTS14Q8WXS8 1223 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 HERVK_113Q902F9 699 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DPF3Q92784 378 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 GFM2Q969S9 779 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RUNDC1Q96C34 613 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RTP4Q96DX8 246 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PTCD3Q96EY7 689 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TRMT2BQ96GJ1 504 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FBXL20Q96IG2 436 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 BOD1Q96IK1 185 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 HIC2Q96JB3 615 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DHRS1Q96LJ7 313 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PRIMPOLQ96LW4 560 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 AK7Q96M32 723 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PCMTD1Q96MG8 357 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ASB2Q96Q27 587 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MMS19Q96T76 1030 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 BARD1Q99728 777 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ACO2Q99798 780 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC25A33Q9BSK2 321 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 AARSD1Q9BTE6 412 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MKNK1Q9BUB5 465 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TUBB6Q9BUF5 446 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SF3B5Q9BWJ5 86 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TEX101Q9BY14 249 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SEZ6LQ9BYH1 1024 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TRIM15Q9C019 465 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MIR1-1HGQ9H1L0 117 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CDT1Q9H211 546 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EPC1Q9H2F5 836 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SMOC1Q9H4F8 434 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EPB41L1Q9H4G0 881 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ALG2Q9H553 416 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM8AQ9HCN3 771 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KCNMB3Q9NPA1 279 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MYOZ2Q9NPC6 264 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ZBTB40Q9NUA8 1239 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM74BQ9NUR3 256 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TFCP2L1Q9NZI6 479 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 USP36Q9P275 1121 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ARHGAP28Q9P2N2 729 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KLHL13Q9P2N7 655 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PI4KBQ9UBF8 816 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 HEY2Q9UBP5 337 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 REV1Q9UBZ9 1251 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CDC42EP3Q9UKI2 254 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 UTS2RQ9UKP6 389 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SCAF8Q9UPN6 1271 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MAP3K2Q9Y2U5 619 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 USP15Q9Y4E8 981 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 NUB1Q9Y5A7 615 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CSAG2Q9Y5P2 127 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RBM8AQ9Y5S9 174 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 BACE2Q9Y5Z0 518 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 X6R8D5 127 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MAST4O15021 2626 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 COL7A1Q02388 2944 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 GAKO14976 1311 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TRGV11A0A075B6L2 103 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 LOC102724159A0A0B4J2E5 919 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A1W2PQ67 120 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NDUFAF8A1L188 74 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SRRM4A7MD48 611 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ERVV-1B6SEH8 477 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PODXLO00592 558 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 WNT10BO00744 389 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MTSS1O43312 755 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PROM1O43490 865 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PRKNO60260 465 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 LMX1BO60663 402 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PRMT3O60678 531 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CNOT3O75175 753 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FBXO24O75426 580 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MAFO75444 373 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TOX4O94842 621 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 HTR3BO95264 441 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NTSR2O95665 410 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms