RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 GLRA2P23416 452 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 PDIA3P30101 505 aaKnown RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 RAB33AQ14088 237 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 TFDP1Q14186 410 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 GAS6Q14393 721 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 EPHA7Q15375 998 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 CCDC6Q16204 474 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 MAEAQ7L5Y9 396 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
SOD1-202ENST00000389995 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 SNTG2Q9NY99 539 aa13.08□□□□□ -0.32
SOD1-202ENST00000389995 ARL2P36404 184 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 NRLP54845 237 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
SOD1-202ENST00000389995 COL9A2Q14055 689 aaPredicted RBP13.07□□□□□ -0.32
SOD1-202ENST00000389995 NAB2Q15742 525 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 N4BP2L1Q5TBK1 243 aaPredicted RBP13.07□□□□□ -0.32
SOD1-202ENST00000389995 BLOC1S2Q6QNY1 142 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 FAM3CQ92520 227 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 CORO1BQ9BR76 489 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 GPRC5CQ9NQ84 441 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
SOD1-202ENST00000389995 C2orf42Q9NWW7 574 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 ANK1P16157 1881 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 NCANO14594 1321 aa13.07□□□□□ -0.32
SOD1-202ENST00000389995 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
SOD1-202ENST00000389995 DMXL2Q8TDJ6 3036 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 MARCH6O60337 910 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 RECQL4O94761 1208 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 SLITRK3O94933 977 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 THP07101 528 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 GJA1P17302 382 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 FGFR3P22607 806 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 RPS6KB1P23443 525 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 GDI1P31150 447 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 VIPR2P41587 438 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 CCR2P41597 374 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 SPIRE1Q08AE8 756 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
SOD1-202ENST00000389995 CSRP2Q16527 193 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 VITQ6UXI7 678 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 TRMT61BQ9BVS5 477 aaKnown RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 POLR3FQ9H1D9 316 aaPredicted RBP13.06□□□□□ -0.32
SOD1-202ENST00000389995 ZSWIM4Q9H7M6 989 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 GOLGA2P5Q9HBQ8 144 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 MTRRQ9UBK8 725 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 ANGPTL2Q9UKU9 493 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
SOD1-202ENST00000389995 NUP205Q92621 2012 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 LRRIQ4A6NIV6 560 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 MAN2B1O00754 1011 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 TBX3O15119 743 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 EDN1P05305 212 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 POU2F2P09086 479 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 CHRNB1P11230 501 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 PTPN2P17706 415 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 LIG1P18858 919 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 CCNE1P24864 410 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 BRCC3P46736 316 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 CXCL12P48061 93 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 CCR3P51677 355 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 ARPP19P56211 112 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 NBR1Q14596 966 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
SOD1-202ENST00000389995 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 PRSS36Q5K4E3 855 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
SOD1-202ENST00000389995 Q6ZS52 159 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 DAGLBQ8NCG7 672 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms