RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 POC1B-GALNT4F8VUJ3 575 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 HNRNPCP07910 306 aaKnown RBP eCLIP20.05■□□□□ 0.84e-6■■■■□ 19.5
PPFIA1-202ENST00000389547 ITGB5P18084 799 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 CYP4F22Q6NT55 531 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 ARHGAP22Q7Z5H3 698 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 PPFIA2O75334 1257 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 LGR5O75473 907 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 TAF1CQ15572 869 aaPredicted RBP20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 TATDN2Q93075 761 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 EME2A4GXA9 379 aaPredicted RBP20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 PRLRP16471 622 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 ATP4AP20648 1035 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 CASP4P49662 377 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 APBB1IPQ7Z5R6 666 aaPredicted RBP20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 CHST13Q8NET6 341 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 MTMR8Q96EF0 704 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 NT5C1BQ96P26 610 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 MSTO1Q9BUK6 570 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 FAM129AQ9BZQ8 928 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 ASCC2Q9H1I8 757 aaPredicted RBP20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
PPFIA1-202ENST00000389547 PDXKO00764 312 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ATP2A1O14983 1001 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 GSTA1P08263 222 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 TRADDQ15628 312 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 NLRP7Q8WX94 980 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 KCNMB3Q9NPA1 279 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ABCF3Q9NUQ8 709 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 WDR91A4D1P6 747 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ARHGAP42A6NI28 874 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 SH3BGRP55822 239 aaPredicted RBP20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 TMED2Q15363 201 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 IQCKQ8N0W5 287 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 SCFD1Q8WVM8 642 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 HAUS1Q96CS2 278 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 FAXDC2Q96IV6 333 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 CENPKQ9BS16 269 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 VPS37BQ9H9H4 285 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 FAF1Q9UNN5 650 aaPredicted RBP20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 NVLO15381 856 aaKnown RBP20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 SLC9A1P19634 815 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ADCY8P40145 1251 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 PIK3CAP42336 1068 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 WLSQ5T9L3 541 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 LRRC71Q8N4P6 559 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 CEP70Q8NHQ1 597 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ERP27Q96DN0 273 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 TLR10Q9BXR5 811 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 ARHGAP20Q9P2F6 1191 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 DNAJC12Q9UKB3 198 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 USTQ9Y2C2 406 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 SHANK3Q9BYB0 1731 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 NXF1Q9UBU9 619 aaKnown RBP20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 PLAGL2Q9UPG8 496 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 PPP2R3BQ9Y5P8 575 aa20.04■□□□□ 0.8
PPFIA1-202ENST00000389547 PITPNM2Q9BZ72 1349 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 FZD9O00144 591 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 ATP9AO75110 1047 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 ZNF280AP59817 542 aaPredicted RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 ITIH3Q06033 890 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 KCNA1Q09470 495 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 SEPT6Q14141 434 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 XKR3Q5GH77 459 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 MFN1Q8IWA4 741 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 SEPT1Q8WYJ6 367 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 GGA2Q9UJY4 613 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 C2CD2Q9Y426 696 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 ATXN2Q99700 1313 aaKnown RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 HSPA9P38646 679 aaKnown RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 PCNX4Q63HM2 1172 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 PDXDC1Q6P996 788 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 SESTD1Q86VW0 696 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 CDR2LQ86X02 465 aaPredicted RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 AGO4Q9HCK5 861 aaKnown RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 USP20Q9Y2K6 914 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 PASKQ96RG2 1323 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 MYO5AQ9Y4I1 1855 aaKnown RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 TRIP13Q15645 432 aaPredicted RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 FBXO16Q8IX29 292 aaPredicted RBP20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 RNF149Q8NC42 400 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 MTMR14Q8NCE2 650 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 PLIN4Q96Q06 1357 aa20.03■□□□□ 0.8
PPFIA1-202ENST00000389547 CLDN3O15551 220 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 CYP2B6P20813 491 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 XRCC4Q13426 336 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 CENPPQ6IPU0 288 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 GPRC5AQ8NFJ5 357 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 PSPC1Q8WXF1 523 aaKnown RBP20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 ADPGKQ9BRR6 497 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 SPC25Q9HBM1 224 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 ACOT2P49753 483 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 ERVK-9P63128 1117 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 ANKRD36CQ5JPF3 1778 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 WDR59Q6PJI9 974 aa20.02■□□□□ 0.8
PPFIA1-202ENST00000389547 EMSYQ7Z589 1322 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms