RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 C1orf54Q8WWF1 131 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 PGBD4Q96DM1 585 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 MAP4P27816 1152 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ANO4Q32M45 955 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 PPP4R4Q6NUP7 873 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 TMEM143Q96AN5 459 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ATXN7L3BQ96GX2 97 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 MAGEB2O15479 319 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 KRT17Q04695 432 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 STK33Q9BYT3 514 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ARHGEF17Q96PE2 2063 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 PDXKO00764 312 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 GFAPP14136 432 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 SLC13A1Q9BZW2 595 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ZC3H7BQ9UGR2 993 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 STXBP3O00186 592 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 RTN2O75298 545 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 RBP5P82980 135 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 SNRNP35Q16560 246 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 POLD4Q9HCU8 107 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 SYTL3Q4VX76 610 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 SMARCAD1Q9H4L7 1026 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 CDV3Q9UKY7 258 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 AP2B1P63010 937 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 MED15Q96RN5 788 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 APEX2Q9UBZ4 518 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 CACNB2Q08289 660 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 FAM84BQ96KN1 310 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 SULT1E1P49888 294 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 FOPNLQ96NB1 174 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 KIF28PB7ZC32 967 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 FOXP2O15409 715 aa12.97□□□□□ -0.33
KCNQ3-201ENST00000388996 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 TBC1D19Q8N5T2 526 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 CASS4Q9NQ75 786 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 FMO5P49326 533 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 SPDYE7PQ495Y7 208 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 RGS9BPQ6ZS82 235 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 MCEEQ96PE7 176 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 TYK2P29597 1187 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 MAPRE2Q15555 327 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 GTF2H3Q13889 308 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 TKFCQ3LXA3 575 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 A0A1W2PQC6 194 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 FGFR4P22455 802 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 SELENONQ9NZV5 590 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 NUP214P35658 2090 aaPredicted RBP12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 NCAPHQ15003 741 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 TTC23LQ6PF05 361 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 C18orf8Q96DM3 657 aa12.96□□□□□ -0.33
KCNQ3-201ENST00000388996 JCADQ9P266 1359 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 KCNN4O15554 427 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 RPAINQ86UA6 219 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 FAM186AA6NE01 2351 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 CACNA1DQ01668 2161 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 IGSF9BQ9UPX0 1349 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 ANGPT2O15123 496 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 AKT1P31749 480 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 ATICP31939 592 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 COG2Q14746 738 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 ESPL1Q14674 2120 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 LTN1O94822 1766 aa12.96□□□□□ -0.34
KCNQ3-201ENST00000388996 PRRG1O14668 218 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 OCM2P0CE71 109 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 OCMP0CE72 109 aaPredicted RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CYP2C19P33261 490 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 FOXO4P98177 505 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms