RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SCFD1Q8WVM8 642 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 DNAJC7Q99615 494 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 ATP2A2P16615 1042 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 PPM1FP49593 454 aaPredicted RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 YWHAEP62258 255 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 DSTYKQ6XUX3 929 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 AENQ8WTP8 325 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 KIF12Q96FN5 646 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 CALR3Q96L12 384 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 KLK14Q9P0G3 267 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 PLAGL2Q9UPG8 496 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 ATF2P15336 505 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 IL9RQ01113 521 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 FBXL13Q8NEE6 735 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 TGS1Q96RS0 853 aaKnown RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 RAB20Q9NX57 234 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 ATMINO43313 823 aaPredicted RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 BPIFB4P59827 614 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 COG7P83436 770 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 PDE1CQ14123 709 aaPredicted RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 C6orf118Q5T5N4 469 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 GPD1LQ8N335 351 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 CCDC89Q8N998 374 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 PRPF31Q8WWY3 499 aaKnown RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 MIS12Q9H081 205 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 TOPORSQ9NS56 1045 aaPredicted RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 FAM53CQ9NYF3 392 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 SCOCQ9UIL1 159 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 POLR2BP30876 1174 aaKnown RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 RRP1BQ14684 758 aaKnown RBP20.02■□□□□ 0.8
CSPG5-202ENST00000383738 WDR59Q6PJI9 974 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 TLR10Q9BXR5 811 aa20.02■□□□□ 0.8
CSPG5-202ENST00000383738 TROVE2P10155 538 aaKnown RBP eCLIP20.02■□□□□ 0.79
CSPG5-202ENST00000383738 FMO5P49326 533 aa20.02■□□□□ 0.79
CSPG5-202ENST00000383738 LRRC36Q1X8D7 754 aa20.02■□□□□ 0.79
CSPG5-202ENST00000383738 PPP6R3Q5H9R7 873 aaPredicted RBP20.02■□□□□ 0.79
CSPG5-202ENST00000383738 TTI2Q6NXR4 508 aa20.02■□□□□ 0.79
CSPG5-202ENST00000383738 C1orf54Q8WWF1 131 aa20.02■□□□□ 0.79
CSPG5-202ENST00000383738 AKAP3O75969 853 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 MKL1Q969V6 931 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 MED15Q96RN5 788 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 SMARCAD1Q9H4L7 1026 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 AGPAT3Q9NRZ7 376 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 CCDC188H7C350 402 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 EPHB6O15197 1021 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 ITGB5P18084 799 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 TMEM132BQ14DG7 1078 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 CEP128Q6ZU80 1094 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.01■□□□□ 0.79
CSPG5-202ENST00000383738 WDR18Q9BV38 432 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 COL1A1P02452 1464 aaPredicted RBP20.01■□□□□ 0.79
CSPG5-202ENST00000383738 RASA4BC9J798 803 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 RASA4O43374 803 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 SLC25A27O95847 323 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 GPC3P51654 580 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 CASP5P51878 434 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 EIF3BP55884 814 aaKnown RBP20.01■□□□□ 0.79
CSPG5-202ENST00000383738 AMPD2Q01433 879 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 MIEF2Q96C03 454 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 SLC4A7Q9Y6M7 1214 aa20.01■□□□□ 0.79
CSPG5-202ENST00000383738 PDGFRBP09619 1106 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 NPTX2P47972 431 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 KIAA1841Q6NSI8 718 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 TATDN1Q6P1N9 297 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 ERICH1Q86X53 443 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 SLC38A10Q9HBR0 1119 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 GOLGA8MH3BSY2 632 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 AGPSO00116 658 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 UBOX5O94941 541 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 ECEL1O95672 775 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 IRX4P78413 519 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 ALCAMQ13740 583 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 SMAD1Q15797 465 aaKnown RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 CROCCP2Q86T23 111 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 SPDYE1Q8NFV5 336 aaPredicted RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 CPA5Q8WXQ8 436 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 RNF25Q96BH1 459 aaPredicted RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 LRFN2Q9ULH4 789 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 AGAP1Q9UPQ3 857 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 F5H423 210 aaPredicted RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 GH1P01241 217 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 CYP2C9P11712 490 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 SLC18A3Q16572 532 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 AMHR2Q16671 573 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 TTC1Q99614 292 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 AGO4Q9HCK5 861 aaKnown RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 KLHL11Q9NVR0 708 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 TXNDC16Q9P2K2 825 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 ANAPC5Q9UJX4 755 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 LRP6O75581 1613 aa20■□□□□ 0.79
CSPG5-202ENST00000383738 GOLGA4Q13439 2230 aaKnown RBP20■□□□□ 0.79
CSPG5-202ENST00000383738 EPS8L3Q8TE67 593 aaKnown RBP19.99■□□□□ 0.79
CSPG5-202ENST00000383738 SNX9Q9Y5X1 595 aa19.99■□□□□ 0.79
CSPG5-202ENST00000383738 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.99■□□□□ 0.79
CSPG5-202ENST00000383738 EXOC1LA0A1B0GW35 172 aa19.99■□□□□ 0.79
CSPG5-202ENST00000383738 H7C0C1 242 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms