RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 CAPN12Q6ZSI9 719 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 TREML1Q86YW5 311 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 IFNL2Q8IZJ0 200 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 SYT2Q8N9I0 419 aaPredicted RBP22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 SLC30A5Q8TAD4 765 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 OLIG1Q8TAK6 271 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 MAML1Q92585 1016 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 TRAF3IP3Q9Y228 551 aa22.29■■□□□ 1.16
NKX3-2-201ENST00000382438 GSTTP1A0A1W2PQM5 241 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 KRT15P19012 456 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 MESDQ14696 234 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 HP1BP3Q5SSJ5 553 aaPredicted RBP22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 C3orf67Q6ZVT6 689 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 SCFD1Q8WVM8 642 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 PANX3Q96QZ0 392 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 STK17AQ9UEE5 414 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 COG7P83436 770 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 PUM3Q15397 648 aaKnown RBP22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 MDH1BQ5I0G3 518 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 UBL4BQ8N7F7 174 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 SIX2Q9NPC8 291 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 TNRQ92752 1358 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 NCANO14594 1321 aa22.28■■□□□ 1.16
NKX3-2-201ENST00000382438 STAT1P42224 750 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 ARFIP2P53365 341 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 MARSP56192 900 aaKnown RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 HERC4Q5GLZ8 1057 aaPredicted RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 RHBDF2Q6PJF5 856 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 TRABD2AQ86V40 505 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 OR6Y1Q8NGX8 325 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 TBCKQ8TEA7 893 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 ABHD8Q96I13 439 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 TUT1Q9H6E5 874 aaKnown RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 GCNT4Q9P109 453 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 CCR3P51677 355 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 JAM2P57087 298 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 GSTM4Q03013 218 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 DCTN2Q13561 401 aaKnown RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 LVRNQ6Q4G3 990 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 TMEM110Q86TL2 294 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 LRRC6Q86X45 466 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 RIN3Q8TB24 985 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 SHKBP1Q8TBC3 707 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 ATG4AQ8WYN0 398 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 ZSWIM1Q9BR11 485 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 POLR3CQ9BUI4 534 aaPredicted RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 UNC45AQ9H3U1 944 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 SH3GLB2Q9NR46 395 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 EMILIN3Q9NT22 766 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 R3HDM2Q9Y2K5 976 aaKnown RBP22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.16
NKX3-2-201ENST00000382438 TMEM247A6NEH6 219 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 A8MXQ7 604 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 B2RBV5 119 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 CYTH3O43739 400 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 ZFXP17010 805 aaPredicted RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 NONOQ15233 471 aaKnown RBP eCLIP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 RNF207Q6ZRF8 634 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 NEK8Q86SG6 692 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 STK33Q9BYT3 514 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 DNAJC18Q9H819 358 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 HEMK1Q9Y5R4 338 aaPredicted RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 H3BRJ5 948 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 GOLGA8HP0CJ92 632 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 HSPA6P17066 643 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 COMTP21964 271 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 AP2B1P63010 937 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 BTKQ06187 659 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 C1orf228Q6PIY5 440 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 SLC13A5Q86YT5 568 aaPredicted RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 CCDC65Q8IXS2 484 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 RANBP17Q9H2T7 1088 aaKnown RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 KCTD10Q9H3F6 313 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 HEY1Q9Y5J3 304 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 BUD23O43709 281 aaKnown RBP22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 TROVE2P10155 538 aaKnown RBP eCLIP22.26■■□□□ 1.151e-18■■■■■ 84.1
NKX3-2-201ENST00000382438 GYS1P13807 737 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 AQP4P55087 323 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 MTMR2Q13614 643 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 GRAMD4Q6IC98 578 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 MTUS1Q9ULD2 1270 aa22.26■■□□□ 1.15
NKX3-2-201ENST00000382438 A0A1W2PPM1 405 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 TSPY2A6NKD2 308 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 EPHA7Q15375 998 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 SIX1Q15475 284 aaPredicted RBP22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 SPDYAQ5MJ70 313 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 CCDC62Q6P9F0 684 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 BTBD6Q96KE9 485 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 CCDC77Q9BR77 488 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 KIAA1586Q9HCI6 787 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 ANKFY1Q9P2R3 1169 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 ACTL7BQ9Y614 415 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 ZMYM2Q9UBW7 1377 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 RARBP10826 455 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 XRCC5P13010 732 aaKnown RBP22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 HIRAP54198 1017 aaPredicted RBP22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 NR1H3Q13133 447 aa22.25■■□□□ 1.15
NKX3-2-201ENST00000382438 TRIM50Q86XT4 487 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms