RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ABLIM1O14639 778 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 MEFVO15553 781 aaPredicted RBP15.52■□□□□ 0.08
SHOX-202ENST00000381575 C8AP07357 584 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 OR1D2P34982 312 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 GRM5P41594 1212 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 RILPL1Q5EBL4 403 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 LIN9Q5TKA1 542 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.52■□□□□ 0.08
SHOX-202ENST00000381575 SLC7A14Q8TBB6 771 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 LRRC15Q8TF66 581 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 C18orf25Q96B23 403 aaPredicted RBP15.52■□□□□ 0.08
SHOX-202ENST00000381575 TCHPQ9BT92 498 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 CCDC94Q9BW85 323 aaPredicted RBP15.52■□□□□ 0.08
SHOX-202ENST00000381575 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 COL4A3Q01955 1670 aa15.52■□□□□ 0.08
SHOX-202ENST00000381575 GALR2O43603 387 aaPredicted RBP15.51■□□□□ 0.07
SHOX-202ENST00000381575 PI15O43692 258 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 NPR3P17342 541 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 FGFR3P22607 806 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 YARSP54577 528 aaKnown RBP15.51■□□□□ 0.07
SHOX-202ENST00000381575 ELAVL2Q12926 359 aaKnown RBP15.51■□□□□ 0.07
SHOX-202ENST00000381575 UPP1Q16831 310 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 PPM1LQ5SGD2 360 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 MPZL3Q6UWV2 235 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 CYP26C1Q6V0L0 522 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 APBB1IPQ7Z5R6 666 aaPredicted RBP15.51■□□□□ 0.07
SHOX-202ENST00000381575 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
SHOX-202ENST00000381575 CDK5RAP3Q96JB5 506 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 SNX27Q96L92 541 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 HCFC1R1Q9NWW0 138 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 IGSF9Q9P2J2 1179 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 EPS15L1Q9UBC2 864 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 CA14Q9ULX7 337 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 SMC3Q9UQE7 1217 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 FRYLO94915 3013 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 CACNA1IQ9P0X4 2223 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 MIA3Q5JRA6 1907 aa15.51■□□□□ 0.07
SHOX-202ENST00000381575 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 PLA2G4BP0C869 781 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 PROZP22891 400 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 FSHRP23945 695 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 GUCY2CP25092 1073 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 DHX8Q14562 1220 aaKnown RBP15.5■□□□□ 0.07
SHOX-202ENST00000381575 HYIQ5T013 277 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
SHOX-202ENST00000381575 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 ALKAL1Q6UXT8 129 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 SLC44A3Q8N4M1 653 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 TOPORSQ9NS56 1045 aaPredicted RBP15.5■□□□□ 0.07
SHOX-202ENST00000381575 MTRRQ9UBK8 725 aa15.5■□□□□ 0.07
SHOX-202ENST00000381575 KRBA1A5PL33 1030 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 PODXLO00592 558 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 PAPLNO95428 1278 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 MCF2P10911 925 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 LAMP2P13473 410 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 PLS3P13797 630 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 GRIN1Q05586 938 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 SPAG1Q07617 926 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 HTR4Q13639 388 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 TMEM119Q4V9L6 283 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 SYT2Q8N9I0 419 aaPredicted RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 TMEM161BQ8NDZ6 487 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 ITFG1Q8TB96 612 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 ING5Q8WYH8 240 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 UROC1Q96N76 676 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 ACAP3Q96P50 834 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 RPP25Q9BUL9 199 aaKnown RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 HAPLN2Q9GZV7 340 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 UPF2Q9HAU5 1272 aaKnown RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 NUMBLQ9Y6R0 609 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 EP300Q09472 2414 aaPredicted RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 GVINP1Q7Z2Y8 2422 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 STK25O00506 426 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 C1RP00736 705 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 MAPTP10636 758 aaKnown RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 MATR3P43243 847 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHOX-202ENST00000381575 ARPP19P56211 112 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 STRN3Q13033 797 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 RAB33AQ14088 237 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 NOLC1Q14978 699 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHOX-202ENST00000381575 ARSHQ5FYA8 562 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
SHOX-202ENST00000381575 GPR152Q8TDT2 470 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 SPIRE2Q8WWL2 714 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 FGF14Q92915 247 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 TBC1D32Q96NH3 1257 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHOX-202ENST00000381575 TUBGCP4Q9UGJ1 667 aa15.49■□□□□ 0.07
SHOX-202ENST00000381575 HNRNPA1P09651 372 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHOX-202ENST00000381575 CXCL8P10145 99 aa15.48■□□□□ 0.07
SHOX-202ENST00000381575 AOC1P19801 751 aa15.48■□□□□ 0.07
SHOX-202ENST00000381575 CLCN5P51795 746 aa15.48■□□□□ 0.07
SHOX-202ENST00000381575 ROR1Q01973 937 aa15.48■□□□□ 0.07
SHOX-202ENST00000381575 SLC10A6Q3KNW5 377 aa15.48■□□□□ 0.07
SHOX-202ENST00000381575 VARS2Q5ST30 1063 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms