RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MICALL2Q8IY33 904 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 CYP2W1Q8TAV3 490 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 AGR3Q8TD06 166 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 ATG4CQ96DT6 458 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 CYFIP2Q96F07 1278 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 CARD9Q9H257 536 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 ANKZF1Q9H8Y5 726 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 AGAP1Q9UPQ3 857 aa18.14■□□□□ 0.5
SGCB-201ENST00000381431 FRMPD1Q5SYB0 1578 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 EIF3DO15371 548 aaKnown RBP eCLIP18.14■□□□□ 0.49
SGCB-201ENST00000381431 ARP10275 920 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 PDGFRAP16234 1089 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 MX2P20592 715 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 SESN2P58004 480 aaPredicted RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 NME3Q13232 169 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 CNOT7Q9UIV1 285 aaKnown RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 RAB44Q7Z6P3 723 aaPredicted RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 SCN4BQ8IWT1 228 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 POLR3CQ9BUI4 534 aaPredicted RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 TRIM4Q9C037 500 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 NEU2Q9Y3R4 380 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.49
SGCB-201ENST00000381431 ITIH2P19823 946 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 EFNA5P52803 228 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 CDR2Q01850 454 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 BEST2Q8NFU1 509 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 VPS39Q96JC1 886 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 SIK2Q9H0K1 926 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 CYP4F11Q9HBI6 524 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 FGFR1OP2Q9NVK5 253 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 PSD3Q9NYI0 1048 aa18.14■□□□□ 0.49
SGCB-201ENST00000381431 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 TMEM120BA0PK00 339 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 KIF3CO14782 793 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 CYTH3O43739 400 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 TTC4O95801 387 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 PMLP29590 882 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 SMTNL2Q2TAL5 461 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 ZNF526Q8TF50 670 aaPredicted RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 SEC16BQ96JE7 1060 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 FAM161BQ96MY7 647 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 DUSP9Q99956 384 aaKnown RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 RAB6BQ9NRW1 208 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 IL1RL1Q01638 556 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 AP1B1Q10567 949 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 TAF1BQ53T94 588 aaPredicted RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 TRIM67Q6ZTA4 783 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 ZNF571Q7Z3V5 609 aaPredicted RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 TRIM56Q9BRZ2 755 aaKnown RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 DDX56Q9NY93 547 aaKnown RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 SLC12A6Q9UHW9 1150 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 PNMA3Q9UL41 463 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 SNX9Q9Y5X1 595 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 A0A0U1RQJ8 604 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 LRIG3Q6UXM1 1119 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 PID1Q7Z2X4 250 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 LRRC71Q8N4P6 559 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 ACSF2Q96CM8 615 aaPredicted RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 CCDC124Q96CT7 223 aaKnown RBP18.13■□□□□ 0.49
SGCB-201ENST00000381431 RIOX1Q9H6W3 641 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 TMEM8AQ9HCN3 771 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 BAG5Q9UL15 447 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 ANGPTL3Q9Y5C1 460 aa18.13■□□□□ 0.49
SGCB-201ENST00000381431 BNIP3LO60238 219 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 TYK2P29597 1187 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 NT5DC1Q5TFE4 455 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 C1orf146Q5VVC0 180 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 HDAC7Q8WUI4 952 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 ATG4AQ8WYN0 398 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 UNC45AQ9H3U1 944 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 BFARQ9NZS9 450 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 GLI1P08151 1106 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 EMC2Q15006 297 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
SGCB-201ENST00000381431 TRMT10CQ7L0Y3 403 aaKnown RBP18.12■□□□□ 0.49
SGCB-201ENST00000381431 MID2Q9UJV3 735 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 ATP5HO75947 161 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 RALAP11233 206 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 ITGA8P53708 1063 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 KIAA1841Q6NSI8 718 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 VGLL2Q8N8G2 317 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 ANGPTL2Q9UKU9 493 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 PPFIA2O75334 1257 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 GYS1P13807 737 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 MDM2Q00987 491 aaPredicted RBP18.12■□□□□ 0.49
SGCB-201ENST00000381431 POU5F1BQ06416 359 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
SGCB-201ENST00000381431 SEPT1Q8WYJ6 367 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 AGAP3Q96P47 875 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 STOML1Q9UBI4 398 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 STAP1Q9ULZ2 295 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 ARL2BPQ9Y2Y0 163 aa18.12■□□□□ 0.49
SGCB-201ENST00000381431 KCNN4O15554 427 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms