RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ABCC12Q96J65 1359 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 UBN2Q6ZU65 1347 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 NPHP1O15259 732 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FOXN1O15353 648 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 CYP7B1O75881 506 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 CDKL5O76039 1030 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 LRG1P02750 347 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 UQCRFS1P1P0C7P4 283 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FGFR2P21802 821 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 GSDMDP57764 484 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TPM4P67936 248 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PAK1Q13153 545 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TRIM29Q14134 588 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 RASA3Q14644 834 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PUM3Q15397 648 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 LONRF3Q496Y0 759 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 HSP90AA4PQ58FG1 418 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 UBXN11Q5T124 520 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ZFYVE27Q5T4F4 411 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SUSD4Q5VX71 490 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 CPLX2Q6PUV4 134 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 FOXP4Q8IVH2 680 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 SMAP1Q8IYB5 467 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 MIGA1Q8NAN2 632 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 UHMK1Q8TAS1 419 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 CLEC4DQ8WXI8 215 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 LPIN2Q92539 896 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PKNOX2Q96KN3 472 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TMEM209Q96SK2 561 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 BPIFA3Q9BQP9 254 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 OSBPL5Q9H0X9 879 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 NAPBQ9H115 298 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 DSEQ9UL01 958 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 HPSEQ9Y251 543 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SLIT2O94813 1529 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 LRP6O75581 1613 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ZNF335Q9H4Z2 1342 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 ATRNO75882 1429 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 MYH6P13533 1939 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 GSG1L2A8MUP6 293 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 BTBD18B2RXH4 712 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TMEM232C9JQI7 657 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SMIM22K7EJ46 135 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 DDX3XO00571 662 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMC6-202ENST00000381272 CUTAO60888 179 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PPP6R2O75170 966 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SERPINC1P01008 464 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 CELA3BP08861 270 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FAM153BP0C7A2 387 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SLC5A1P13866 664 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 NAT1P18440 290 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TDO2P48775 406 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TOB1P50616 345 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 UBASH3AP57075 661 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 GRIN1Q05586 938 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 MAP3K12Q12852 859 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TUSC3Q13454 348 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ALX1Q15699 326 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ZC3H12BQ5HYM0 836 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 FAM26FQ5R3K3 315 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PRR31Q5SQ13 230 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 AKNAD1Q5T1N1 836 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PRAMEF18Q5VWM3 479 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FOXB2Q5VYV0 432 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 RESP18Q5W5W9 173 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SYT10Q6XYQ8 523 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FAM124AQ86V42 546 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 GRAMD1CQ8IYS0 662 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ZNF34Q8IZ26 560 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 LCORLQ8N3X6 602 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 CNNM3Q8NE01 707 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 TIGD1Q96MW7 591 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 WRNIP1Q96S55 665 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SRPK1Q96SB4 655 aaKnown RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 MPHOSPH8Q99549 860 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 DHRS4Q9BTZ2 278 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 HSD3B7Q9H2F3 369 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 IPPKQ9H8X2 491 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 FANCLQ9NW38 375 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 SNTG2Q9NY99 539 aa4.21□□□□□ -1.74
SMC6-202ENST00000381272 ZNF215Q9UL58 517 aaPredicted RBP4.21□□□□□ -1.74
SMC6-202ENST00000381272 ARAP2Q8WZ64 1704 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 DOCK2Q92608 1830 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 MROH5Q6ZUA9 1318 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 BCL9O00512 1426 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 TAF1P21675 1872 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 hCG_1642624A0A1W2PR95 340 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 FAM221BA6H8Z2 402 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 EXOC5O00471 708 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 IKBKBO14920 756 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 NKRFO15226 690 aaKnown RBP eCLIP4.2□□□□□ -1.74
SMC6-202ENST00000381272 PRICKLE3O43900 615 aaPredicted RBP4.2□□□□□ -1.74
SMC6-202ENST00000381272 SFPQP23246 707 aaKnown RBP eCLIP4.2□□□□□ -1.74
SMC6-202ENST00000381272 GABREP78334 506 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 WTAPQ15007 396 aa4.2□□□□□ -1.74
SMC6-202ENST00000381272 SYCP1Q15431 976 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms