RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GRM5P41594 1212 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 AFMP43652 599 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 GCGRP47871 477 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 OR1G1P47890 313 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 SLC11A1P49279 550 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 YARSP54577 528 aaKnown RBP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 ASIC1P78348 528 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 KRT17Q04695 432 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 UBE3AQ05086 875 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 NOLC1Q14978 699 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 GRAMD1CQ8IYS0 662 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 SLC39A11Q8N1S5 342 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 CEP120Q8N960 986 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 FSIP1Q8NA03 581 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 TMEM169Q96HH4 297 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 MFSD14AQ96MC6 490 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 POP1Q99575 1024 aaKnown RBP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 BLZF1Q9H2G9 400 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 NSUN3Q9H649 340 aaKnown RBP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 MAGEF1Q9HAY2 307 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 SEL1LQ9UBV2 794 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 FAN1Q9Y2M0 1017 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 RALGAPA2Q2PPJ7 1873 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 FNDC1Q4ZHG4 1894 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-202ENST00000380747 WDR87Q6ZQQ6 2873 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 NLRC5Q86WI3 1866 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 A0A1W2PQ27 194 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 A0A1W2PQ64 194 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 A0A1W2PQD8 194 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CARNS1A5YM72 827 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 GOLGA6L4A6NEF3 574 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 H3BQ06 376 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 ABLIM1O14639 778 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 NRP1O14786 923 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 HNRNPDLO14979 420 aaKnown RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 INPPL1O15357 1258 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CLDN3O15551 220 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 NR1I2O75469 434 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 GCNT3O95395 438 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 SLFN14P0C7P3 912 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 MYBP10242 640 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 PROZP22891 400 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CASP1P29466 404 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CA8P35219 290 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 IRS1P35568 1242 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 SYKP43405 635 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 NDUFA8P51970 172 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 GTF2BQ00403 316 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 GRIK3Q13003 919 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 COASYQ13057 564 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 SMAD2Q15796 467 aaKnown RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CTC1Q2NKJ3 1217 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 SEZ6Q53EL9 994 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 TCEAL5Q5H9L2 206 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 ZNF720Q7Z2F6 126 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 BMP8AQ7Z5Y6 402 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 GSTCDQ8NEC7 633 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 ACAP3Q96P50 834 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 C7orf25Q9BPX7 421 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 TMEM175Q9BSA9 504 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 TRIM9Q9C026 710 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 CXCL16Q9H2A7 254 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 ENTPD7Q9NQZ7 604 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 TLR9Q9NR96 1032 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 PRG3Q9Y2Y8 225 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-202ENST00000380747 PCDHGC5Q9Y5F6 944 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 KIAA1671Q9BY89 1806 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
HMGN1-202ENST00000380747 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 SPTLC1O15269 473 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ACTN4O43707 911 aaKnown RBP10.08□□□□□ -0.8
HMGN1-202ENST00000380747 RNF40O75150 1001 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 PIGRP01833 764 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 THP07101 528 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 NDUFV2P19404 249 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 CASP5P51878 434 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ERVFC1P60507 584 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 MCL1Q07820 350 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 CUL4BQ13620 913 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 CAMK1Q14012 370 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 GLRA4Q5JXX5 417 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 PLPP4Q5VZY2 271 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 EP400NLQ6ZTU2 488 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 TMC7Q7Z402 723 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
HMGN1-202ENST00000380747 COLGALT2Q8IYK4 626 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 SYCP3Q8IZU3 236 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 BCL7CQ8WUZ0 217 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-202ENST00000380747 RABGGTAQ92696 567 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 KCNN1Q92952 543 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 HPS3Q969F9 1004 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 HVCN1Q96D96 273 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms