RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CRYZL1O95825 349 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 AGTP01019 485 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 PPARGP37231 505 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 MEA1Q16626 185 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 POTEAQ6S8J7 498 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 NATD1Q8N6N6 113 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 LINC00469Q8N7U9 141 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 SEPT10Q9P0V9 454 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZNHIT2Q9UHR6 403 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 MAST3O60307 1309 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 GRID2IPA4D2P6 1211 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZSCAN5BA6NJL1 495 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 TXNDC9O14530 226 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZNF213O14771 459 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 BAG2O95816 211 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 EIF2S1P05198 315 aaKnown RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 IGKV5-2P06315 115 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ATP1A4Q13733 1029 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 TUBA3CQ13748 450 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 PTPAQ15257 358 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 TMEM63BQ5T3F8 832 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 TTC23LQ6PF05 361 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 USP43Q70EL4 1123 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 RASSF3Q86WH2 238 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 RNF169Q8NCN4 708 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 EXD1Q8NHP7 514 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 MCUR1Q96AQ8 359 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 TGS1Q96RS0 853 aaKnown RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 CYTH2Q99418 400 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 GRIP2Q9C0E4 1043 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 C12orf4Q9NQ89 552 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 AGPAT5Q9NUQ2 364 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 HEMK1Q9Y5R4 338 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 RFX7Q2KHR2 1363 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 C5P01031 1676 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 A0A087WZG4 1122 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 K7EPI3 171 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 MYBP10242 640 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 UBA7P41226 1012 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 BASP1P80723 227 aaKnown RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 THOC5Q13769 683 aaKnown RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 LMBR1LQ6UX01 489 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 CYB5R4Q7L1T6 521 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 NCOA7Q8NI08 942 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 EFHD2Q96C19 240 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 NOX5Q96PH1 765 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 NUF2Q9BZD4 464 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 XAB2Q9HCS7 855 aaKnown RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 CRNNQ9UBG3 495 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 CHKBQ9Y259 395 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 PCDHGA8Q9Y5G5 932 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 GLI3P10071 1580 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 MYH11P35749 1972 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 LOC102724428A0A0B4J2F2 783 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 MAPK13O15264 365 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 ICMTO60725 284 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 KCNJ13O60928 360 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 FGAP02671 866 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 T-ENOLP0DO92 83 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 ERFP50548 548 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 SIK1P57059 783 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 TCP11X2Q5H9J9 407 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 DCDC5Q6ZRR9 648 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 ANKRD13DQ6ZTN6 518 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 RFX8Q6ZV50 586 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 AMIGO3Q86WK7 504 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 ADSSL1Q8N142 457 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 INPP4AQ96PE3 977 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 STMN4Q9H169 189 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-204ENST00000380393 NDE1Q9NXR1 346 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
PTPRA-204ENST00000380393 A6NL46 340 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ANXA13P27216 316 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ADAM17P78536 824 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 PTPN12Q05209 780 aaKnown RBP9.9□□□□□ -0.82
PTPRA-204ENST00000380393 RASGRF1Q13972 1273 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 STK11Q15831 433 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 DCAF6Q58WW2 860 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 SCYL3Q8IZE3 742 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 MB21D1Q8N884 522 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 TOR1AIP2Q8NFQ8 470 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 TNIP2Q8NFZ5 429 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 CTRCQ99895 268 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 BLZF1Q9H2G9 400 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 KCNK9Q9NPC2 374 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 RRN3Q9NYV6 651 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 AIPL1Q9NZN9 384 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms