RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 KRT7P08729 469 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SERPINB3P29508 390 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NME3Q13232 169 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 C2CD6Q53TS8 623 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 FAM182BQ5T319 152 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 FBXL13Q8NEE6 735 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CAVIN3Q969G5 261 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NMD3Q96D46 503 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CYP26B1Q9NR63 512 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 C20orf96Q9NUD7 363 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KBTBD4Q9NVX7 518 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OSBPP22059 807 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ROR1Q01973 937 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OCA2Q04671 838 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PPP1R2P3Q6NXS1 205 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 C1orf228Q6PIY5 440 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SLC47A2Q86VL8 602 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 AGGF1Q8N302 714 aaeCLIP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MCEEQ96PE7 176 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ISCA1Q9BUE6 129 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MSTO1Q9BUK6 570 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ROPN1BQ9BZX4 212 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ROPN1Q9HAT0 212 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SCHIP1Q9P0W5 487 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 HEY2Q9UBP5 337 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MROH1Q8NDA8 1641 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RGPD2P0DJD1 1756 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 B2RBV5 119 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 FOXP2O15409 715 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MAN1A2O60476 641 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RALAP11233 206 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MLH1P40692 756 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CASP4P49662 377 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 GRM4Q14833 912 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ZNF699Q32M78 642 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KDELC2Q7Z4H8 507 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MIEF2Q96C03 454 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PGBD4Q96DM1 585 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 HAUS8Q9BT25 410 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CDCA7Q9BWT1 371 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OVOS2A0A0J9YW53 1432 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OVOS2Q6IE36 1432 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KPNA7A9QM74 516 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 FOXN3O00409 490 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ASAP2O43150 1006 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MAP3K6O95382 1288 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 GH2P01242 217 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PAMP19021 973 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 EFTUD2Q15029 972 aaKnown RBP eCLIP4.42□□□□□ -1.78e-7■■■■□ 19.8
BRCA2-201ENST00000380152 TFDP3Q5H9I0 405 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CDKAL1Q5VV42 579 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 LRRC8EQ6NSJ5 796 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KLC3Q6P597 504 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RNF169Q8NCN4 708 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CMTM5Q96DZ9 223 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 WWP1Q9H0M0 922 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 AS3MTQ9HBK9 375 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SALL1Q9NSC2 1324 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 E2F8A0AVK6 867 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SLC1A1P43005 524 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PRELPP51888 382 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 Q3C1V9 767 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PADI6Q6TGC4 694 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MTDHQ86UE4 582 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SYN2Q92777 582 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 EXT2Q93063 718 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MTMR8Q96EF0 704 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RMDN3Q96TC7 470 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SHCBP1LQ9BZQ2 653 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TRIM15Q9C019 465 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 INTS2Q9H0H0 1204 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SEMA4AQ9H3S1 761 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CHCHD3Q9NX63 227 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MYO3BQ8WXR4 1341 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PPEF1O14829 653 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TBXAS1P24557 533 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CCND2P30279 289 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MAGEA4P43358 317 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 QARSP47897 775 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TTC39BQ5VTQ0 682 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TMC3Q7Z5M5 1100 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TSEN2Q8NCE0 465 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TMEM35BQ8NCS4 154 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 C3orf20Q8ND61 904 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ATG4AQ8WYN0 398 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OSBPL8Q9BZF1 889 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ADNPQ9H2P0 1102 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ATP6V0A4Q9HBG4 840 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 STX18Q9P2W9 335 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 E2F6O75461 281 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CALB1P05937 261 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RARGP13631 454 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 FXR2P51116 673 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 CDH6P55285 790 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 DAB2P98082 770 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 IYDQ6PHW0 289 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms