RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 IGF2BP3O00425 579 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNX2-201ENST00000379516 MMP3P08254 477 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 PROZP22891 400 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 PHKA2P46019 1235 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 CUL2Q13617 745 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 NCOA4Q13772 614 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 IQSEC1Q6DN90 963 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 NT5DC3Q86UY8 548 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 RASAL3Q86YV0 1011 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 WDR49Q8IV35 697 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 THNSL1Q8IYQ7 743 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 DDX1Q92499 740 aaKnown RBP16.17■□□□□ 0.18
SNX2-201ENST00000379516 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
SNX2-201ENST00000379516 PTPRHQ9HD43 1115 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 CTTNBP2NLQ9P2B4 639 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
SNX2-201ENST00000379516 CALCAP01258 141 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 IQCF3P0C7M6 154 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 TMOD1P28289 359 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 AP3M2P53677 418 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 OSTNP61366 133 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 GRM1Q13255 1194 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 PBKQ96KB5 322 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 NFKBIZQ9BYH8 718 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 IFT122Q9HBG6 1241 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 COG5Q9UP83 839 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 COL1A2P08123 1366 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 A0A087WZ62 844 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 CES2O00748 559 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 ATP8B1O43520 1251 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 VTNP04004 478 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 MCM3P25205 808 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 NOP14P78316 857 aaKnown RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 TAF1CQ15572 869 aaPredicted RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 DGKDQ16760 1214 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 BEND6Q5SZJ8 279 aaPredicted RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 EEF1DP3Q658K8 133 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 FDXACB1Q9BRP7 624 aaPredicted RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 LRRC1Q9BTT6 524 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 MTMR12Q9C0I1 747 aa16.16■□□□□ 0.18
SNX2-201ENST00000379516 PRMT7Q9NVM4 692 aaPredicted RBP16.16■□□□□ 0.18
SNX2-201ENST00000379516 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 CEP104O60308 925 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 ZMYND10O75800 440 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 POU5F1BQ06416 359 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 SURF1Q15526 300 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 DUOXA2Q1HG44 320 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 SCARA3Q6AZY7 606 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 IMPG2Q9BZV3 1241 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 TNFSF13BQ9Y275 285 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 NUB1Q9Y5A7 615 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 PCDHB4Q9Y5E5 795 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 PCDHB2Q9Y5E7 798 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 ADCY6O43306 1168 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 SASH3O75995 380 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 CLTAP09496 248 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 ACO1P21399 889 aaKnown RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 BPIFB4P59827 614 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 TFAMQ00059 246 aaKnown RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 MAP2K5Q13163 448 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 MORN1Q5T089 497 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 CEP120Q8N960 986 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 HES6Q96HZ4 224 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
SNX2-201ENST00000379516 CHORDC1Q9UHD1 332 aaPredicted RBP16.15■□□□□ 0.18
SNX2-201ENST00000379516 UMODL1Q5DID0 1318 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 DYNC1LI2O43237 492 aaPredicted RBP16.14■□□□□ 0.17
SNX2-201ENST00000379516 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
SNX2-201ENST00000379516 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
SNX2-201ENST00000379516 HADHBP55084 474 aaKnown RBP16.14■□□□□ 0.17
SNX2-201ENST00000379516 MRPS25P82663 173 aaKnown RBP16.14■□□□□ 0.17
SNX2-201ENST00000379516 GRIK4Q16099 956 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 ACAD10Q6JQN1 1059 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 USP38Q8NB14 1042 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 HINFPQ9BQA5 517 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 FUT8Q9BYC5 575 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 CDT1Q9H211 546 aa16.14■□□□□ 0.17
SNX2-201ENST00000379516 TMEM191BP0C7N4 346 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 HOXD8P13378 290 aaPredicted RBP16.13■□□□□ 0.17
SNX2-201ENST00000379516 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 CLEC16AQ2KHT3 1053 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 TMEM270Q6UE05 265 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 KRT222Q8N1A0 295 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 ZNF653Q96CK0 615 aa16.13■□□□□ 0.17
SNX2-201ENST00000379516 CALR3Q96L12 384 aaKnown RBP16.13■□□□□ 0.17
SNX2-201ENST00000379516 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms