RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 C3orf58Q8NDZ4 430 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 LNX1Q8TBB1 728 aaPredicted RBP16.07■□□□□ 0.16
SMS-201ENST00000379404 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 HASPINQ8TF76 798 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 FBXL18Q96ME1 805 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 UROC1Q96N76 676 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 PHF7Q9BWX1 381 aaPredicted RBP16.07■□□□□ 0.16
SMS-201ENST00000379404 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 DZANK1Q9NVP4 752 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 SEL1LQ9UBV2 794 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 SF3B1O75533 1304 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■■■ 43.1
SMS-201ENST00000379404 CITO14578 2027 aa16.07■□□□□ 0.16
SMS-201ENST00000379404 TRIOO75962 3097 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 VWA8A3KMH1 1905 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 CLTAP09496 248 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 ABCD1P33897 745 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 LIG4P49917 911 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 KCNA1Q09470 495 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 TPRNQ4KMQ1 711 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 FAM171A1Q5VUB5 890 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 RIN2Q8WYP3 895 aaPredicted RBP16.06■□□□□ 0.16
SMS-201ENST00000379404 PIK3R5Q8WYR1 880 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 C18orf25Q96B23 403 aaPredicted RBP16.06■□□□□ 0.16
SMS-201ENST00000379404 CLSTN3Q9BQT9 956 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 TTPALQ9BTX7 342 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 PLEKHA5Q9HAU0 1116 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 OLFML3Q9NRN5 406 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMS-201ENST00000379404 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
SMS-201ENST00000379404 TISP43B9A030 160 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 OGTO15294 1046 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 B3GAT3O94766 335 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 ADH1AP07327 375 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 CXCL8P10145 99 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 GAP43P17677 238 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 FGFR3P22607 806 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 ADSSP30520 456 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 SSTR3P32745 418 aaPredicted RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 ENOX2Q16206 610 aaKnown RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 CNNM4Q6P4Q7 775 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 STAMQ92783 540 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 BICD1Q96G01 975 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 DDX27Q96GQ7 796 aaKnown RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 CHAMP1Q96JM3 812 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 POP1Q99575 1024 aaKnown RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 FGFBP2Q9BYJ0 223 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 CUEDC2Q9H467 287 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 CPSF3Q9UKF6 684 aaKnown RBP16.05■□□□□ 0.16
SMS-201ENST00000379404 PLXNA3P51805 1871 aa16.05■□□□□ 0.16
SMS-201ENST00000379404 PDCD11Q14690 1871 aaKnown RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 LACTBL1A8MY62 500 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 PODXLO00592 558 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 TGM5O43548 720 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 RPL17P18621 184 aaKnown RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 RPL9P32969 192 aaKnown RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 CASP5P51878 434 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 KYAT1Q16773 422 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 RARS2Q5T160 578 aaKnown RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 RESP18Q5W5W9 173 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 TMEM130Q8N3G9 435 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
SMS-201ENST00000379404 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 TRIM9Q9C026 710 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 POMKQ9H5K3 350 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 C11orf16Q9NQ32 467 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
SMS-201ENST00000379404 ADAM12O43184 909 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 WEE2P0C1S8 567 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 BRCC3P46736 316 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 SPAG1Q07617 926 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
SMS-201ENST00000379404 CES5AQ6NT32 575 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
SMS-201ENST00000379404 TMC5Q6UXY8 1006 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 PALB2Q86YC2 1186 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 IQUBQ8NA54 791 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 DHX58Q96C10 678 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 NECTIN4Q96NY8 510 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 SFXN1Q9H9B4 322 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
SMS-201ENST00000379404 MAN1C1Q9NR34 630 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
SMS-201ENST00000379404 MTCL1Q9Y4B5 1905 aaKnown RBP16.03■□□□□ 0.16
SMS-201ENST00000379404 I3L4J1 428 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms