RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TBXAS1P24557 533 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 DNAAF5Q86Y56 855 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 HDAC7Q8WUI4 952 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 FGD4Q96M96 766 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 POP1Q99575 1024 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ST7Q9NRC1 585 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 RBAKQ9NYW8 714 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PTCH2Q9Y6C5 1203 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNFX1Q9P2E3 1918 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ZSWIM8A7E2V4 1837 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 GOLGA6L10A0A0M3HER8 536 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ZMYND10O75800 440 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 MYBL1P10243 752 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PIK3CAP42336 1068 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 NLRP11P59045 1033 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CCNA1P78396 465 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CUL1Q13616 776 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 TFDP1Q14186 410 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 TTLL4Q14679 1199 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ALS2CLQ60I27 953 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 ACAD10Q6JQN1 1059 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 CRELD2Q6UXH1 353 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 TRIM72Q6ZMU5 477 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 MAATS1Q7Z4T9 603 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 SLC47A2Q86VL8 602 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 BRSK2Q8IWQ3 736 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 MREGQ8N565 214 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 GLG1Q92896 1179 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 WNT8AQ9H1J5 351 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 GOLPH3Q9H4A6 298 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 SMARCAD1Q9H4L7 1026 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 TXNRD2Q9NNW7 524 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
POLR2J3-201ENST00000379340 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 BHMG1C9JSJ3 638 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 KRIT1O00522 736 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 ASAP2O43150 1006 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 RAD51CO43502 376 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 HBP1O60381 514 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 PEX10O60683 326 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 TOM1L1O75674 476 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 MMEP08473 750 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 SP3Q02447 781 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 BIRC3Q13489 604 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 CLEC16AQ2KHT3 1053 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 TAF3Q5VWG9 929 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 CCDC62Q6P9F0 684 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 TATDN2Q93075 761 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.23□□□□□ -0.615e-7■■■■□ 20.6
POLR2J3-201ENST00000379340 COG5Q9UP83 839 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
POLR2J3-201ENST00000379340 CCDC66A2RUB6 948 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 CLDN3O15551 220 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 OPA1O60313 960 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ARIH2O95376 493 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 PGK2P07205 417 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 GLI1P08151 1106 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 KRT5P13647 590 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 CTNNA2P26232 953 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ACOT2P49753 483 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 INHBEP58166 350 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 PLCB4Q15147 1175 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 Q3C1V9 767 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 KLHL7Q8IXQ5 586 aa11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 GSPT2Q8IYD1 628 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 ZNF564Q8TBZ8 553 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-201ENST00000379340 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms