RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TMEM161BQ8NDZ6 487 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 ZNF396Q96N95 335 aaPredicted RBP20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 TARS2Q9BW92 718 aaKnown RBP20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 PRKD2Q9BZL6 878 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 SPDYE4A6NLX3 237 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 ASGR2P07307 311 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 SPATA31D3P0C874 917 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 KCNE1P15382 129 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 RPL17P18621 184 aaKnown RBP20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 KARSQ15046 597 aaKnown RBP20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 ARSHQ5FYA8 562 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 MPZL3Q6UWV2 235 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 SPATA31D4Q6ZUB0 917 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 HASPINQ8TF76 798 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 CALML4Q96GE6 196 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 EPSTI1Q96J88 318 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 CCDC94Q9BW85 323 aaPredicted RBP20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 TOPORSQ9NS56 1045 aaPredicted RBP20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 FBXW11Q9UKB1 542 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 ZDHHC9Q9Y397 364 aa20.72■□□□□ 0.91
TMEM88B-201ENST00000378821 CITO14578 2027 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 DOCK8Q8NF50 2099 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 SLC16A4O15374 487 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 ZMYND10O75800 440 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 PLA2G4BP0C869 781 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 MAPTP10636 758 aaKnown RBP20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 PLCG1P19174 1290 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 IGFBP6P24592 240 aaPredicted RBP20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 CLCNKBP51801 687 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 NUBP1P53384 320 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 PSMD5Q16401 504 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 ZNF568Q3ZCX4 644 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 KRI1Q8N9T8 703 aaKnown RBP20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 PRSS33Q8NF86 280 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 SMG7Q92540 1137 aaKnown RBP20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 CCSER1Q9C0I3 900 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 SMOC2Q9H3U7 446 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 IGSF9Q9P2J2 1179 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 EPS15L1Q9UBC2 864 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 CLUHO75153 1309 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 PDCD11Q14690 1871 aaKnown RBP20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 ZDBF2Q9HCK1 2354 aa20.71■□□□□ 0.91
TMEM88B-201ENST00000378821 MEFVO15553 781 aaPredicted RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 TOM1L1O75674 476 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 B3GAT3O94766 335 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 YEATS4O95619 227 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 AVPR2P30518 371 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 SMTNP53814 917 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 YARSP54577 528 aaKnown RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 VCPP55072 806 aaKnown RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 SOX4Q06945 474 aaPredicted RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 RAB33AQ14088 237 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 GLRA4Q5JXX5 417 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 ZPBP2Q6X784 338 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 RTL10Q7L3V2 364 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 RASSF8Q8NHQ8 419 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 STAMQ92783 540 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 DDX27Q96GQ7 796 aaKnown RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 SNX27Q96L92 541 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 ZMAT2Q96NC0 199 aaKnown RBP20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 KCNK12Q9HB15 430 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 BLOC1S4Q9NUP1 217 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 SLC38A7Q9NVC3 462 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 CNTN3Q9P232 1028 aa20.7■□□□□ 0.9
TMEM88B-201ENST00000378821 SPTLC2O15270 562 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 PDGFBP01127 241 aaPredicted RBP20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 POU2F2P09086 479 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 HNRNPA1P09651 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 SCP2P22307 547 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 HOXA9P31269 272 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 NCKAP1LP55160 1127 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 TDGQ13569 410 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 CEP57Q86XR8 500 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 GLYCTKQ8IVS8 523 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 C3orf58Q8NDZ4 430 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 ZBTB45Q96K62 511 aaPredicted RBP20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 ACAP3Q96P50 834 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.69■□□□□ 0.95e-7■■■■■ 34.8
TMEM88B-201ENST00000378821 MTRRQ9UBK8 725 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 ODF2LQ9ULJ1 636 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 BACE2Q9Y5Z0 518 aa20.69■□□□□ 0.9
TMEM88B-201ENST00000378821 H0YCG3 227 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 ADAM12O43184 909 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 TRAPPC3O43617 180 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 PPP6R2O75170 966 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 ZNF131P52739 623 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 DNM1Q05193 864 aaKnown RBP20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 MCL1Q07820 350 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 RAD51AP2Q09MP3 1159 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 STRN3Q13033 797 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 NXPE3Q969Y0 559 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 GOLGA2P5Q9HBQ8 144 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 LARSQ9P2J5 1176 aaKnown RBP20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 DUSP12Q9UNI6 340 aa20.68■□□□□ 0.9
TMEM88B-201ENST00000378821 RPL9P32969 192 aaKnown RBP20.67■□□□□ 0.9
TMEM88B-201ENST00000378821 OSTNP61366 133 aa20.67■□□□□ 0.9
TMEM88B-201ENST00000378821 TCF15Q12870 199 aa20.67■□□□□ 0.9
TMEM88B-201ENST00000378821 MCM6Q14566 821 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms