RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SLC8A2Q9UPR5 921 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ATP9AO75110 1047 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 PRKAR1AP10644 381 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 FGFR2P21802 821 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 CUL4AQ13619 759 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 WASHC2DQ5SRD0 308 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 PLA2G4DQ86XP0 818 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 SETD9Q8NE22 299 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 MAST3O60307 1309 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ATP6V1G2O95670 118 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 IRAK1P51617 712 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 AMER2Q8N7J2 671 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 SLC13A1Q9BZW2 595 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 DDX56Q9NY93 547 aaKnown RBP9.16□□□□□ -0.94
LIG3-202ENST00000378526 B2RBV5 119 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 E5RI56 91 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 PLCG1P19174 1290 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ZNF846Q147U1 533 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 PTGISQ16647 500 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 FAM135BQ49AJ0 1406 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ZBTB8OSQ8IWT0 167 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 C17orf80Q9BSJ5 609 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 TRABDQ9H4I3 376 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 CORO1CQ9ULV4 474 aaPredicted RBP9.16□□□□□ -0.94
LIG3-202ENST00000378526 MATN2O00339 956 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 LRRC63Q05C16 580 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 FOXD4Q12950 439 aaPredicted RBP9.16□□□□□ -0.94
LIG3-202ENST00000378526 KCNT1Q5JUK3 1230 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 CCNYL1Q8N7R7 359 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 BDH2Q9BUT1 245 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 VPS11Q9H270 941 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 RABL2BQ9UNT1 228 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 NCALDP61601 193 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
LIG3-202ENST00000378526 ATG14Q6ZNE5 492 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 DEPTORQ8TB45 409 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
LIG3-202ENST00000378526 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 SPAG6O75602 509 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 FKBP9O95302 570 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 ATP5BP06576 529 aaKnown RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 C1orf189Q5VU69 101 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 FKBP9P1Q75LS8 142 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 CYP4Z2PQ8N1L4 340 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 TNNQ9UQP3 1299 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 KATNA1O75449 491 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PYHIN1Q6K0P9 492 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 BORCS5Q969J3 196 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PPP1R14AQ96A00 147 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PPP1R2P1Q96PQ5 205 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 TEKT3Q9BXF9 490 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 ZNF224Q9NZL3 707 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 KPNA5O15131 536 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 ATP4AP20648 1035 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 KCNQ4P56696 695 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 XRCC4Q13426 336 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 SNX30Q5VWJ9 437 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 FAAH2Q6GMR7 532 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 MSANTD1Q6ZTZ1 278 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PSMC3IPQ9P2W1 217 aaPredicted RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 EIF4A3P38919 411 aaKnown RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 SERPINB9P50453 376 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 KRT26Q7Z3Y9 468 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 TMEM110Q86TL2 294 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 IZUMO1Q8IYV9 350 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 DENND6BQ8NEG7 585 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 ADPGKQ9BRR6 497 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 L1RE1Q9UN81 338 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PFASO15067 1338 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 HECW1Q76N89 1606 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 CCDC115Q96NT0 180 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 NUAK2Q9H093 628 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 PNPLA8Q9NP80 782 aa9.15□□□□□ -0.94
LIG3-202ENST00000378526 CUEDC1Q9NWM3 386 aaPredicted RBP9.15□□□□□ -0.94
LIG3-202ENST00000378526 GOLGA8SH3BPF8 625 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 K7ENM7 598 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 TYK2P29597 1187 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 CIITAP33076 1130 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 PLA2G4AP47712 749 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 SMCO1Q147U7 214 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 KCTD21Q4G0X4 260 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 FAM9CQ8IZT9 166 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 FAR2Q96K12 515 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 NCOA1Q15788 1441 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 PALMO75781 387 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 GFPT2O94808 682 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms