RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 PRSS55Q6UWB4 352 aaPredicted RBP15.58■□□□□ 0.08
CLCN6-203ENST00000376490 SPATA31D4Q6ZUB0 917 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 CEP57Q86XR8 500 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 GLYCTKQ8IVS8 523 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 C18orf25Q96B23 403 aaPredicted RBP15.58■□□□□ 0.08
CLCN6-203ENST00000376490 FBXL18Q96ME1 805 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 IKZF4Q9H2S9 585 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 ADAM7Q9H2U9 754 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 PCDHA7Q9UN72 937 aa15.58■□□□□ 0.08
CLCN6-203ENST00000376490 SF3B1O75533 1304 aaKnown RBP eCLIP15.58■□□□□ 0.089e-7■■■■■ 57.4
CLCN6-203ENST00000376490 B3GAT3O94766 335 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 PIGRP01833 764 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 CLTAP09496 248 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 IDEP14735 1019 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 SPAG1Q07617 926 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 E2F4Q16254 413 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 ZBTB41Q5SVQ8 909 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 ATL3Q6DD88 541 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 CES5AQ6NT32 575 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 RPGRIP1Q96KN7 1286 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 UROC1Q96N76 676 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 TTPALQ9BTX7 342 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 PHF7Q9BWX1 381 aaPredicted RBP15.57■□□□□ 0.08
CLCN6-203ENST00000376490 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 MRPL44Q9H9J2 332 aaKnown RBP15.57■□□□□ 0.08
CLCN6-203ENST00000376490 DZANK1Q9NVP4 752 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 RCOR1Q9UKL0 485 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
CLCN6-203ENST00000376490 A0A0B4J269 797 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 LOC730098B7Z3J9 87 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 TISP43B9A030 160 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 PI4K2BG5E9Z4 385 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 I3L4J1 428 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 FAM189A1O60320 539 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 ADH1AP07327 375 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 CXCL8P10145 99 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 GAP43P17677 238 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 BRCC3P46736 316 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 ME1P48163 572 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 ITIH3Q06033 890 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 HERC4Q5GLZ8 1057 aaPredicted RBP15.56■□□□□ 0.08
CLCN6-203ENST00000376490 TMC5Q6UXY8 1006 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 MAP4K3Q8IVH8 894 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 TMEM130Q8N3G9 435 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 C3orf58Q8NDZ4 430 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 LNX1Q8TBB1 728 aaPredicted RBP15.56■□□□□ 0.08
CLCN6-203ENST00000376490 KCNG4Q8TDN1 519 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 DHX58Q96C10 678 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 DDX27Q96GQ7 796 aaKnown RBP15.56■□□□□ 0.08
CLCN6-203ENST00000376490 POP1Q99575 1024 aaKnown RBP15.56■□□□□ 0.08
CLCN6-203ENST00000376490 STRA6Q9BX79 667 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 SLC38A7Q9NVC3 462 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 PANK4Q9NVE7 773 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 FNIP2Q9P278 1114 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 SEL1LQ9UBV2 794 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 DENND4AQ7Z401 1863 aa15.56■□□□□ 0.08
CLCN6-203ENST00000376490 SCN1AP35498 2009 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 TTC26A0AVF1 554 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 LACTBL1A8MY62 500 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 TMEM189-UBE2V1I3L0A0 370 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 OGTO15294 1046 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 ABCD1P33897 745 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 KCNA1Q09470 495 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 ELAVL2Q12926 359 aaKnown RBP15.55■□□□□ 0.08
CLCN6-203ENST00000376490 RNF135Q8IUD6 432 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 GPR65Q8IYL9 337 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 CLSTN3Q9BQT9 956 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 MSTO1Q9BUK6 570 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 POMKQ9H5K3 350 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 PLEKHA5Q9HAU0 1116 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 MAN1C1Q9NR34 630 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLCN6-203ENST00000376490 KBTBD4Q9NVX7 518 aa15.55■□□□□ 0.08
CLCN6-203ENST00000376490 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 FRMD3A2A2Y4 597 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 PODXLO00592 558 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 POLR2DO15514 142 aaKnown RBP15.54■□□□□ 0.08
CLCN6-203ENST00000376490 TGM5O43548 720 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 PPP1R37O75864 691 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 GLUD1P00367 558 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 FGFR3P22607 806 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
CLCN6-203ENST00000376490 RPL9P32969 192 aaKnown RBP15.54■□□□□ 0.08
CLCN6-203ENST00000376490 MTHFRP42898 656 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 CASP5P51878 434 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 ENOX2Q16206 610 aaKnown RBP15.54■□□□□ 0.08
CLCN6-203ENST00000376490 PSMD5Q16401 504 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 KYAT1Q16773 422 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 ATAT1Q5SQI0 421 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 LILRA6Q6PI73 481 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 PIK3R5Q8WYR1 880 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
CLCN6-203ENST00000376490 SFXN1Q9H9B4 322 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms