RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 PLEKHM3Q6ZWE6 761 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 FAM49BQ9NUQ9 324 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 XPO7Q9UIA9 1087 aaKnown RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 WDR47O94967 919 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 PRKCBP05771 671 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 GRM4Q14833 912 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 ANKS3Q6ZW76 656 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 HAUS6Q7Z4H7 955 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 ADCK1Q86TW2 530 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 DPF2Q92785 391 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 BARHL2Q9NY43 387 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 FKBP9O95302 570 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 TRPC1P48995 793 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 SKOR1P84550 965 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 LVRNQ6Q4G3 990 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 FKBP9P1Q75LS8 142 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 AIM2O14862 343 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 HDAC4P56524 1084 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 CDK17Q00537 523 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 SLC35G2Q8TBE7 412 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 C2orf40Q9H1Z8 148 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 MROH7-TTC4A0A0A0MT08 1334 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 ORC4O43929 436 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 HSPA1AP0DMV8 641 aaKnown RBP14.43□□□□□ -0.1
COL4A1-201ENST00000375820 HSPA1BP0DMV9 641 aaKnown RBP14.43□□□□□ -0.1
COL4A1-201ENST00000375820 BTKQ06187 659 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 CCDC142Q17RM4 750 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 DUOXA2Q1HG44 320 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
COL4A1-201ENST00000375820 SHC4Q6S5L8 630 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 MMS22LQ6ZRQ5 1243 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 WDR24Q96S15 920 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 TASP1Q9H6P5 420 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 C6orf203Q9P0P8 240 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-201ENST00000375820 PKP3Q9Y446 797 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 ATP5HO75947 161 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 TXNP10599 105 aaKnown RBP14.43□□□□□ -0.1
COL4A1-201ENST00000375820 CNGA3Q16281 694 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 LATS2Q9NRM7 1088 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 CD274Q9NZQ7 290 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 DOLKQ9UPQ8 538 aa14.43□□□□□ -0.1
COL4A1-201ENST00000375820 TADA2AO75478 443 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 HNRNPCP07910 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 CHRNA5P30532 468 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 SARM1Q6SZW1 724 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 C20orf96Q9NUD7 363 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 RFX3P48380 749 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 ARL4DP49703 201 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 KLK7P49862 253 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 MRPL28Q13084 256 aaKnown RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 USP10Q14694 798 aaKnown RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 MFSD14CQ5VZR4 134 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 C9orf72Q96LT7 481 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 C17orf80Q9BSJ5 609 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 ACAD9Q9H845 621 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 RAB6BQ9NRW1 208 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 CHN1P15882 459 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 NR1H3Q13133 447 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 EPC2Q52LR7 807 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 RERGLQ9H628 205 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 SELENONQ9NZV5 590 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 ADGRG1Q9Y653 693 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 C2CD2LO14523 706 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 HSPA9P38646 679 aaKnown RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 TWF1Q12792 350 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 PLA2G4FQ68DD2 849 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 CHP1Q99653 195 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 EHD2Q9NZN4 543 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 CHMP2BQ9UQN3 213 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 H7C1W4 665 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 SERPINI2O75830 405 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 AVPR1AP37288 418 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 FAM162AQ96A26 154 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 IL17RAQ96F46 866 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 MRPL40Q9NQ50 206 aaKnown RBP14.42□□□□□ -0.1
COL4A1-201ENST00000375820 FBXO40Q9UH90 709 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 ATP11BQ9Y2G3 1177 aa14.42□□□□□ -0.1
COL4A1-201ENST00000375820 ZNF197O14709 1029 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 APPL2Q8NEU8 664 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 PHF21AQ96BD5 680 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 FAM20AQ96MK3 541 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 ARHGEF38Q9NXL2 777 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 USE1Q9NZ43 259 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 CPA2P48052 419 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 AMHR2Q16671 573 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 LDHDQ86WU2 507 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 MIER2Q8N344 545 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 KIF2BQ8N4N8 673 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 ZNF555Q8NEP9 628 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 PTPRN2Q92932 1015 aa14.41□□□□□ -0.1
COL4A1-201ENST00000375820 IGKV5-2P06315 115 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms