RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 AK8Q96MA6 479 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 DDX23Q9BUQ8 820 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 APOL6Q9BWW8 343 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 XPNPEP1Q9NQW7 623 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 ANKEF1Q9NU02 776 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 FBXO4Q9UKT5 387 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 OTOGLQ3ZCN5 2332 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 A0A1B0GUA9 196 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 KANSL1LA0AUZ9 987 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 F8W810 466 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 MYBP10242 640 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 SDHBP21912 280 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 CCT6AP40227 531 aaKnown RBP13.38□□□□□ -0.27
LSM2-208ENST00000375661 GPC5P78333 572 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 PFKPQ01813 784 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
LSM2-208ENST00000375661 TUSC3Q13454 348 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 CAPSQ13938 189 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 HSP90AA2PQ14568 343 aaPredicted RBP13.38□□□□□ -0.27
LSM2-208ENST00000375661 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
LSM2-208ENST00000375661 KRT79Q5XKE5 535 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 HAUS3Q68CZ6 603 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 USP49Q70CQ1 688 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 RTL10Q7L3V2 364 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
LSM2-208ENST00000375661 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 FGF14Q92915 247 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 B3GALT6Q96L58 329 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 PCDHA7Q9UN72 937 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
LSM2-208ENST00000375661 LAMTOR5O43504 91 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 XYLBO75191 536 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 GLULP15104 373 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
LSM2-208ENST00000375661 MUTP22033 750 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 ARL2P36404 184 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
LSM2-208ENST00000375661 RTP2Q5QGT7 225 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 PPM1LQ5SGD2 360 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 HYIQ5T013 277 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
LSM2-208ENST00000375661 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
LSM2-208ENST00000375661 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 FOXQ1Q9C009 403 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 CCSER1Q9C0I3 900 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 GDPD2Q9HCC8 539 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 PCDHGA2Q9Y5H1 932 aa13.37□□□□□ -0.27
LSM2-208ENST00000375661 CUTAO60888 179 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 NPTXRO95502 500 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
LSM2-208ENST00000375661 GLRA2P23416 452 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 AKAP5P24588 427 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 UBA7P41226 1012 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 PSMD5Q16401 504 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 PRSS55Q6UWB4 352 aaPredicted RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 PARM1Q6UWI2 310 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 ASAP3Q8TDY4 903 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 LRRC15Q8TF66 581 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 FGF13Q92913 245 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 SPATA32Q96LK8 384 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 NELL2Q99435 816 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 PLIN2Q99541 437 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 RPP25Q9BUL9 199 aaKnown RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 PRMT7Q9NVM4 692 aaPredicted RBP13.36□□□□□ -0.27
LSM2-208ENST00000375661 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 KIAA1024Q9UPX6 916 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 DMXL1Q9Y485 3027 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
LSM2-208ENST00000375661 E9PMD0 336 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 NCAM2O15394 837 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 C8AP07357 584 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 RARRES1P49788 294 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
LSM2-208ENST00000375661 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
LSM2-208ENST00000375661 FAM187BQ17R55 369 aa13.35□□□□□ -0.27
LSM2-208ENST00000375661 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms