RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RASGEF1CQ8N431 466 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 TRIM6Q9C030 488 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 A0A1W2PPM1 405 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 RTN2O75298 545 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 AGTP01019 485 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 KRT1P04264 644 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 KRT19P08727 400 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 MMP13P45452 471 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 MFAP3P55082 362 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 FMO1Q01740 532 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 EML3Q32P44 896 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 COBLL1Q53SF7 1204 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 NETO2Q8NC67 525 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 RUBCNQ92622 972 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ZBTB10Q96DT7 871 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 MKNK1Q9BUB5 465 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 C1orf112Q9NSG2 853 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 NINJ2Q9NZG7 142 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 GAKO14976 1311 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 LAMB2P55268 1798 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 PODXLO00592 558 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 CSDE1O75534 798 aaKnown RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 ARSEP51690 589 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 TAS2R40P59535 323 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MTMR1Q13613 665 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 DPY19L2P1Q6NXN4 242 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 SLFN11Q7Z7L1 901 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 PIH1D1Q9NWS0 290 aaKnown RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MARK3P27448 753 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 CNGA1P29973 690 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 SSTR1P30872 391 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 FOXN2P32314 431 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 COPS2P61201 443 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MXRA7P84157 204 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 CDO1Q16878 200 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MIEF2Q96C03 454 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MYLK2Q9H1R3 596 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 ARMCX1Q9P291 453 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
MCF2L-202ENST00000375597 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 RPL7AP62424 266 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 MKL1Q969V6 931 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 BAG2O95816 211 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 RARGP13631 454 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 ZC3H18Q86VM9 953 aaKnown RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 SNF8Q96H20 258 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 PLVAPQ9BX97 442 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 GRAP2O75791 330 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 LIG4P49917 911 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 HIRAP54198 1017 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 DMP1Q13316 513 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-202ENST00000375597 WDR44Q5JSH3 913 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 SWSAP1Q6NVH7 229 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 VSTM1Q6UX27 236 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 MAML1Q92585 1016 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 DNPEPQ9ULA0 475 aa12.53□□□□□ -0.4
MCF2L-202ENST00000375597 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 WEE2P0C1S8 567 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 RPA3P35244 121 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-202ENST00000375597 MUM1Q2TAK8 710 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms