RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GSTA3Q16772 222 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TMEM266Q2M3C6 531 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 DUPD1Q68J44 220 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TGS1Q96RS0 853 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 OATP04181 439 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 BACE1P56817 501 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 KCNMA1Q12791 1236 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 TNFAIP8L3Q5GJ75 292 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ANKRD42Q8N9B4 389 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 UHMK1Q8TAS1 419 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SCG3Q8WXD2 468 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 GATA6Q92908 595 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ERP27Q96DN0 273 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 MYLK2Q9H1R3 596 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 RMI1Q9H9A7 625 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 DBR1Q9UK59 544 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SIGLEC16A6NMB1 481 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ENTPD5O75356 428 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 USP2O75604 605 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 EYA4O95677 639 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 FCER1AP12319 257 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 STX2P32856 288 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 MAGEA10P43363 369 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 USP46P62068 366 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ARID5AQ03989 594 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 LSAMPQ13449 338 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 MAP7Q14244 749 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ASIC2Q16515 512 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 PTPROQ16827 1216 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 COBLL1Q53SF7 1204 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SYCE1Q8N0S2 351 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC57Q8N9N7 239 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ROPN1BQ9BZX4 212 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 ROPN1Q9HAT0 212 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 KCNK9Q9NPC2 374 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 SUCLA2Q9P2R7 463 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-203ENST00000375315 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 CSADQ9Y600 493 aa12.94□□□□□ -0.34
C9orf3-203ENST00000375315 POLR2FP61218 127 aaKnown RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 AMPD3Q01432 767 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 MGAT5Q09328 741 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 MTFR1Q15390 333 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 KCNK18Q7Z418 384 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 HAS1Q92839 578 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 CALML4Q96GE6 196 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 DENND2DQ9H6A0 471 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 E9PMD0 336 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 PTENP60484 403 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 ECM1Q16610 540 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 KCTD19Q17RG1 926 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC37BQ96QE4 947 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 HAPLN3Q96S86 360 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 SEMA4AQ9H3S1 761 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 TMOD4Q9NZQ9 345 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 KIAA1024Q9UPX6 916 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 POTECB2RU33 542 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 MAPK13O15264 365 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 MARK3P27448 753 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 EPHB2P29323 1055 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 DRG2P55039 364 aaKnown RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 GRM1Q13255 1194 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 KRT79Q5XKE5 535 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 SEPT14Q6ZU15 432 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 GDAP1Q8TB36 358 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 FBXO25Q8TCJ0 367 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 OLFM3Q96PB7 478 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 LSM14BQ9BX40 385 aaKnown RBP12.93□□□□□ -0.34
C9orf3-203ENST00000375315 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
C9orf3-203ENST00000375315 BZW2Q9Y6E2 419 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms