RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FAM205AQ6ZU69 1335 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 IGF2BP3O00425 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 COL23A1Q86Y22 540 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 KCTD17Q8N5Z5 321 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CCNYL1Q8N7R7 359 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 FBXO25Q8TCJ0 367 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CAVIN3Q969G5 261 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 GTF3C4Q9UKN8 822 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 INPP5FQ9Y2H2 1132 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 ANGPTL3Q9Y5C1 460 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 TECPR2O15040 1411 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 WDR46O15213 610 aaKnown RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 P4HA2O15460 535 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 DGAT1O75907 488 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 PPP4CP60510 307 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 C4orf50Q6ZRC1 276 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 LONP2Q86WA8 852 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 C18orf8Q96DM3 657 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 FAM118BQ9BPY3 351 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 PPCSQ9HAB8 311 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CD248Q9HCU0 757 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 ASAP2O43150 1006 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 FGFR2P21802 821 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 BAG6P46379 1132 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 ACOT2P49753 483 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 AP3M2P53677 418 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 CASP7P55210 303 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 Q3C1V9 767 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 GPR75-ASB3A0A0A6YYF3 556 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 FNTAP49354 379 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 MORF4L2Q15014 288 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 C1orf228Q6PIY5 440 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 TTLL6Q8N841 843 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
PTCH1-203ENST00000375274 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
PTCH1-203ENST00000375274 KIAA0391O15091 583 aaKnown RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 TAC1P20366 129 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 HIC1Q14526 733 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 SERPINB12Q96P63 405 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 AGPAT3Q9NRZ7 376 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FOXN3O00409 490 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 APRTP07741 180 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 RASSF3Q86WH2 238 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 CDKL3Q8IVW4 592 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 RIBC1Q8N443 379 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 NRBF2Q96F24 287 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ZNF668Q96K58 619 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ZSWIM1Q9BR11 485 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 HOXC10Q9NYD6 342 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FNDC3AQ9Y2H6 1198 aaKnown RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 MAP2K7O14733 419 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 SLC4A1P02730 911 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 S100BP04271 92 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ENO1P06733 434 aaKnown RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 PHKA2P46019 1235 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FGD4Q96M96 766 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 OLFM3Q96PB7 478 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FAM193BQ96PV7 902 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 TOPORSQ9NS56 1045 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ORC6Q9Y5N6 252 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 A0A087X0B3 334 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 PMLP29590 882 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 DYNC1I2Q13409 638 aaKnown RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 RBBP8NLQ8NC74 664 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-203ENST00000375274 FAM129AQ9BZQ8 928 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 RAB6BQ9NRW1 208 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 GTSE1Q9NYZ3 720 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 ZFATQ9P243 1243 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms