RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 VCLP18206 1134 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CCNA2P20248 432 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 HSD17B3P37058 310 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 KIF19Q2TAC6 998 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 RESP18Q5W5W9 173 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 SCARA3Q6AZY7 606 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PGM2Q96G03 612 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 SAMSN1Q9NSI8 373 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 KIAA1107Q9UPP5 1409 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CSE1LP55060 971 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 KCNT1Q5JUK3 1230 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TRIM72Q6ZMU5 477 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 NME9Q86XW9 330 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 KBTBD3Q8NAB2 608 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ACTRT1Q8TDG2 376 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 GDPD5Q8WTR4 605 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TCEANC2Q96MN5 208 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 HINFPQ9BQA5 517 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 RUVBL2Q9Y230 463 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 F6X3S4 739 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 SLC26A4O43511 780 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 IL32P24001 234 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ARHGEF3Q9NR81 526 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZPR1O75312 459 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 HOXB7P09629 217 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ACAT1P24752 427 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZNF200P98182 395 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 ENOSF1Q7L5Y1 443 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 NEDD1Q8NHV4 660 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PPP1R2P1Q96PQ5 205 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZBTB1Q9Y2K1 713 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 CCDC189A1A4V9 331 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 KRT87PA6NCN2 255 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 MED7O43513 233 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 CDC40O60508 579 aaKnown RBP eCLIP6.94□□□□□ -1.38e-7■□□□□ 10.2
UBR4-204ENST00000375254 SIN3BO75182 1162 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZNF806P0C7X5 589 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 GPD2P43304 727 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 QARSP47897 775 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 C1DQ13901 141 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 SETD9Q8NE22 299 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ATF7P17544 494 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 PMLP29590 882 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PLOD1Q02809 727 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 NAB2Q15742 525 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 CCNJLQ8IV13 435 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 MARCH7Q9H992 704 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 A0A1W2PQ72 361 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 CCDC60Q8IWA6 550 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 FANCBQ8NB91 859 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ARHGEF33A8MVX0 844 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 DRG2P55039 364 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 PLCL1Q15111 1095 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 HAVCR1Q96D42 359 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TMEM165Q9HC07 324 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 H2AFY2Q9P0M6 372 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 PFDN2Q9UHV9 154 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PRG3Q9Y2Y8 225 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 RB1CC1Q8TDY2 1594 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 SEMA3DO95025 777 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 IFNA7P01567 189 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 STAT5AP42229 794 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 STARP49675 285 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 STAT5BP51692 787 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 MPP3Q13368 585 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PALB2Q86YC2 1186 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 AADATQ8N5Z0 425 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 KIFC1Q9BW19 673 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 DDX56Q9NY93 547 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 UBP1Q9NZI7 540 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 BTBD18B2RXH4 712 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 UNC5CO95185 931 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ZFYVE1Q9HBF4 777 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 WHRNQ9P202 907 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PLCL2Q9UPR0 1127 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PCP4L1A6NKN8 68 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ENO2P09104 434 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 MYL6BP14649 208 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TWF2Q6IBS0 349 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 NET1Q7Z628 596 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 ACAT2Q9BWD1 397 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ERAP1Q9NZ08 941 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 H7C2Y5 167 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PSMD3O43242 534 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 STIP1P31948 543 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 GNG2P59768 71 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TSHZ3Q63HK5 1081 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PSMA8Q8TAA3 256 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 NARS2Q96I59 477 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 POLR3AO14802 1390 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 A6NJR5 290 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 RORAP35398 523 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms