RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 A0A0G2JND7 137 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 DFFAO00273 331 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 MUTP22033 750 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SERPINB4P48594 390 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 ARHGEF7Q14155 803 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CXorf38Q8TB03 319 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 MXRA8Q9BRK3 442 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC30A1Q9Y6M5 507 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CROCC2H7BZ55 1655 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SSU72P8A0A1W2PR75 194 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 KRT16P08779 473 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 LCP1P13796 627 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CYP2B6P20813 491 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 ARL4DP49703 201 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 NCOA4Q13772 614 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SPAG6O75602 509 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC2A3P11169 496 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 GCKP35557 465 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SERPINB9P50453 376 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 USP13Q92995 863 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CYTH2Q99418 400 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CAPN11Q9UMQ6 739 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 HAUS5O94927 633 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 KCNA2P16389 499 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 MED21Q13503 144 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 EFHC1Q5JVL4 640 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 IZUMO3Q5VZ72 239 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 GYG2O15488 501 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 HOXC6P09630 235 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ZBTB17Q13105 803 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 CCDC137Q6PK04 289 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 LRRC43Q8N309 656 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 PDGFRAP16234 1089 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ATF7IP2Q5U623 682 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 NUDCD3Q8IVD9 361 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 DPP7Q9UHL4 492 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC7A5Q01650 507 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 PRKCEQ02156 737 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 GRAMD1BQ3KR37 738 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 FRMD8Q9BZ67 464 aaPredicted RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 TAF1DQ9H5J8 278 aaPredicted RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 TRPC7Q9HCX4 862 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 UBQLN1Q9UMX0 589 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 SNX5Q9Y5X3 404 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 H7C4K7 107 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 PSMD14O00487 310 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ASMTLO95671 621 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 MAP3K10Q02779 954 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 FASTKD1Q53R41 847 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ZBTB41Q5SVQ8 909 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ZBED8Q8IZ13 594 aa11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 ST13P4Q8IZP2 240 aaPredicted RBP11.69□□□□□ -0.54
PHACTR4-202ENST00000373839 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 EEF1DP29692 281 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 RGS4P49798 205 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 DOLKQ9UPQ8 538 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 NTSR2O95665 410 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 ALDH1A3P47895 512 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 PDK1Q15118 436 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SNRNP35Q16560 246 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 HIF1AQ16665 826 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 EFL1Q7Z2Z2 1120 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 TRPA1O75762 1119 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 NMT1P30419 496 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 ARFIP2P53365 341 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 HABP4Q5JVS0 413 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms