RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 STK24Q9Y6E0 443 aa17.72■□□□□ 0.43
HDAC8-202ENST00000373556 TKTP29401 623 aaKnown RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 GRM5P41594 1212 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 YARSP54577 528 aaKnown RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 MAPK7Q13164 816 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 DMP1Q13316 513 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 UPP1Q16831 310 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 AXDND1Q5T1B0 1012 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 RINT1Q6NUQ1 792 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 DTWD2Q8NBA8 298 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 FGF14Q92915 247 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 UROC1Q96N76 676 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 RPP25Q9BUL9 199 aaKnown RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 CCDC94Q9BW85 323 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 TBC1D17Q9HA65 648 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 KMT5AQ9NQR1 393 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.71■□□□□ 0.43
HDAC8-202ENST00000373556 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 CDY1Q9Y6F8 540 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 MYH11P35749 1972 aa17.71■□□□□ 0.43
HDAC8-202ENST00000373556 CITO14578 2027 aa17.71■□□□□ 0.42
HDAC8-202ENST00000373556 NOTCH4Q99466 2003 aa17.71■□□□□ 0.42
HDAC8-202ENST00000373556 PRR23AA6NEV1 266 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 SFI1A8K8P3 1242 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 LAD1O00515 517 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 XYLBO75191 536 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 HARSP12081 509 aaKnown RBP17.7■□□□□ 0.42
HDAC8-202ENST00000373556 PRPHP41219 470 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 RAD51AP2Q09MP3 1159 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 RAB33AQ14088 237 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 ANGPT1Q15389 498 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 MCTP1Q6DN14 999 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 PARM1Q6UWI2 310 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 DTHD1Q6ZMT9 781 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 C1orf186Q6ZWK4 172 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 ITFG1Q8TB96 612 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
HDAC8-202ENST00000373556 DRC1Q96MC2 740 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 MRPL4Q9BYD3 311 aaKnown RBP17.7■□□□□ 0.42
HDAC8-202ENST00000373556 TMEM134Q9H6X4 195 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 TOPORSQ9NS56 1045 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-202ENST00000373556 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 ARHGAP28Q9P2N2 729 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 CDH7Q9ULB5 785 aa17.7■□□□□ 0.42
HDAC8-202ENST00000373556 RIF1Q5UIP0 2472 aaKnown RBP17.7■□□□□ 0.42
HDAC8-202ENST00000373556 COL4A3Q01955 1670 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 SLC16A4O15374 487 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 HOXA9P31269 272 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 ALKAL1Q6UXT8 129 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 FGF13Q92913 245 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 SNX27Q96L92 541 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
HDAC8-202ENST00000373556 PLIN2Q99541 437 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 TCHPQ9BT92 498 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 ARHGEF3Q9NR81 526 aa17.69■□□□□ 0.42
HDAC8-202ENST00000373556 PODXLO00592 558 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 ABLIM1O14639 778 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 TRAPPC3O43617 180 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 MCF2P10911 925 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 PROZP22891 400 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 PTPRZ1P23471 2315 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 PDCD11Q14690 1871 aaKnown RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 XKR4Q5GH76 650 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 SPECC1Q5M775 1068 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 ING5Q8WYH8 240 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 C18orf25Q96B23 403 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 ZBTB45Q96K62 511 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 PNMA5Q96PV4 448 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 SLC2A4RGQ9NR83 387 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 BACE2Q9Y5Z0 518 aa17.68■□□□□ 0.42
HDAC8-202ENST00000373556 ZFP37Q9Y6Q3 630 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-202ENST00000373556 DCNP07585 359 aaKnown RBP17.67■□□□□ 0.42
HDAC8-202ENST00000373556 GPC5P78333 572 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 ATP2C1P98194 919 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-202ENST00000373556 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 PABPC1LQ4VXU2 614 aaKnown RBP17.67■□□□□ 0.42
HDAC8-202ENST00000373556 SEZ6Q53EL9 994 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 MPZL3Q6UWV2 235 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 NKD2Q969F2 451 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-202ENST00000373556 ACAP3Q96P50 834 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 SLC38A7Q9NVC3 462 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
HDAC8-202ENST00000373556 WDR87Q6ZQQ6 2873 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 FAM186AA6NE01 2351 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 SPTBN4Q9H254 2564 aa17.67■□□□□ 0.42
HDAC8-202ENST00000373556 VWA3AA6NCI4 1184 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 GUCY2CP25092 1073 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 ARPP19P56211 112 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 ROR1Q01973 937 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-202ENST00000373556 RABEP1Q15276 862 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 VARS2Q5ST30 1063 aaKnown RBP17.66■□□□□ 0.42
HDAC8-202ENST00000373556 KXD1Q9BQD3 176 aa17.66■□□□□ 0.42
HDAC8-202ENST00000373556 FOXQ1Q9C009 403 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms