RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 UROC1Q96N76 676 aa19.9■□□□□ 0.78
PBX3-202ENST00000373482 ZMAT2Q96NC0 199 aaKnown RBP19.9■□□□□ 0.78
PBX3-202ENST00000373482 TSG101Q99816 390 aa19.9■□□□□ 0.78
PBX3-202ENST00000373482 COLEC11Q9BWP8 271 aa19.9■□□□□ 0.78
PBX3-202ENST00000373482 MTMR10Q9NXD2 777 aa19.9■□□□□ 0.78
PBX3-202ENST00000373482 PUF60Q9UHX1 559 aaKnown RBP19.9■□□□□ 0.78
PBX3-202ENST00000373482 UBQLN1Q9UMX0 589 aaKnown RBP19.9■□□□□ 0.78
PBX3-202ENST00000373482 DERAQ9Y315 318 aa19.9■□□□□ 0.78
PBX3-202ENST00000373482 CASTOR2A6NHX0 329 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 RFXAPO00287 272 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 MEFVO15553 781 aaPredicted RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 B4GALT3O60512 393 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 NR3C1P04150 777 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 ITGB1P05556 798 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 RPL13P26373 211 aaKnown RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 PLCB3Q01970 1234 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 UBE3AQ05086 875 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 SURF1Q15526 300 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 NAB2Q15742 525 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 SNRNP35Q16560 246 aaKnown RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 NFIL3Q16649 462 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 PTPROQ16827 1216 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 JADE1Q6IE81 842 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 RDH13Q8NBN7 331 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 TMEM174Q8WUU8 243 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 DHTKD1Q96HY7 919 aaPredicted RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 FBXL18Q96ME1 805 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 LMAN2LQ9H0V9 348 aa19.89■□□□□ 0.77
PBX3-202ENST00000373482 ALG13Q9NP73 1137 aaKnown RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 PRG3Q9Y2Y8 225 aaPredicted RBP19.89■□□□□ 0.77
PBX3-202ENST00000373482 MYO7AQ13402 2215 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 SZT2Q5T011 3432 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 SPAG1Q07617 926 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 TMEM132DQ14C87 1099 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 EDRF1Q3B7T1 1238 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 CENPPQ6IPU0 288 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 NT5DC4Q86YG4 428 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 CBWD2Q8IUF1 395 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 BEST2Q8NFU1 509 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 SYAP1Q96A49 352 aaPredicted RBP19.88■□□□□ 0.77
PBX3-202ENST00000373482 DDX27Q96GQ7 796 aaKnown RBP19.88■□□□□ 0.77
PBX3-202ENST00000373482 IGSF21Q96ID5 467 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 CDX2Q99626 313 aaPredicted RBP19.88■□□□□ 0.77
PBX3-202ENST00000373482 DMAC2Q9NW81 257 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 STK39Q9UEW8 545 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 LZTS1Q9Y250 596 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 FRMD4BQ9Y2L6 1034 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 C2CD2Q9Y426 696 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 PRRC2BQ5JSZ5 2229 aaKnown RBP19.88■□□□□ 0.77
PBX3-202ENST00000373482 TRANK1O15050 2925 aa19.88■□□□□ 0.77
PBX3-202ENST00000373482 MTCL1Q9Y4B5 1905 aaKnown RBP19.88■□□□□ 0.77
PBX3-202ENST00000373482 CYP3A5P20815 502 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 BMP6P22004 513 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 IGFBP4P22692 258 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 NR2F2P24468 414 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 LRRC63Q05C16 580 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 CCDC183Q5T5S1 534 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 CEP135Q66GS9 1140 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 SPPL3Q8TCT6 385 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 CACTINQ8WUQ7 758 aaKnown RBP19.87■□□□□ 0.77
PBX3-202ENST00000373482 POF1BQ8WVV4 589 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 GUCD1Q96NT3 240 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 GOLGA2P5Q9HBQ8 144 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 LMCD1Q9NZU5 365 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 CDH23Q9H251 3354 aa19.87■□□□□ 0.77
PBX3-202ENST00000373482 BICDL2A1A5D9 508 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 GRM6O15303 877 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 TADA2AO75478 443 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 CCNE1P24864 410 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 RPL9P32969 192 aaKnown RBP19.86■□□□□ 0.77
PBX3-202ENST00000373482 CLCNKBP51801 687 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 SOX4Q06945 474 aaPredicted RBP19.86■□□□□ 0.77
PBX3-202ENST00000373482 ADAM9Q13443 819 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 BMS1Q14692 1282 aaKnown RBP19.86■□□□□ 0.77
PBX3-202ENST00000373482 ZBTB6Q15916 424 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 ZCWPW2Q504Y3 356 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 KLHL10Q6JEL2 608 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 MYLIPQ8WY64 445 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 C18orf25Q96B23 403 aaPredicted RBP19.86■□□□□ 0.77
PBX3-202ENST00000373482 FNBP1Q96RU3 617 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 PAAF1Q9BRP4 392 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 PDE11AQ9HCR9 933 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 TLR9Q9NR96 1032 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 ADAM28Q9UKQ2 775 aa19.86■□□□□ 0.77
PBX3-202ENST00000373482 LPXNO60711 386 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 NFICP08651 508 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 FOSL2P15408 326 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 CD44P16070 742 aaKnown RBP19.85■□□□□ 0.77
PBX3-202ENST00000373482 CYP24A1Q07973 514 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 UPP1Q16831 310 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 SPATA1Q5VX52 437 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 ANKRD40Q6AI12 368 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 DCLRE1AQ6PJP8 1040 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 DDX53Q86TM3 631 aaKnown RBP19.85■□□□□ 0.77
PBX3-202ENST00000373482 RABGGTAQ92696 567 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 MRPL38Q96DV4 380 aaKnown RBP19.85■□□□□ 0.77
PBX3-202ENST00000373482 CACNG4Q9UBN1 327 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 TUBGCP4Q9UGJ1 667 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 DACH1Q9UI36 760 aa19.85■□□□□ 0.77
PBX3-202ENST00000373482 CTNND2Q9UQB3 1225 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms